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5T33
Crystal structure of strain-specific glycan-dependent cd4 binding site-directed neutralizing antibody cap257-rh1, in complex with hiv-1 strain rhpa gp120 core with an oligomannose n276 glycan.
PDB DOI: 10.2210/pdb5t33/pdb
Classification: IMMUNE SYSTEM Organism(s): Homo Sapiens , Human Immunodeficiency Virus
Deposited: 2016-08-24 Deposition Author(s): Gorman, J. , Kwong, P.D. , Wibmer, C.K.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3.2092 Å
Crystal structure of strain-specific glycan-dependent cd4 binding site-directed neutralizing antibody cap257-rh1, in complex with hiv-1 strain rhpa gp120 core with an oligomannose n276 glycan.
Gorman, J. , Kwong, P.D. , Wibmer, C.K.
Primary Citation of Related Structures: 5T33
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| CAP257-RH1 heavy chain | H | 223 | Homo Sapiens , Human Immunodeficiency Virus | QVQLVESGGGLFQPGRSLRLSCVASGFSFNEKAMHWVRQAPGKGLEWVAIIWYNSIHKNYADSVKGRFTISRDNSKNTLYLQMNSLRADDTAVYYCANAGGGKYDYLDVWGRGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC |
| CAP257-RH1 light chain | L | 214 | Homo Sapiens , Human Immunodeficiency Virus | SYELTQPPSVSVSPGQTARITCSGDTLSTKWSYWCQQKSGQAPVLVIYEGNKRFSGTPAKFSGFHSGTMATLTISGAQVDDEADYYCFSTDSSGQTWVFGGGTKLTVLRQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS |
| RHPA gp120 core | G | 357 | Homo Sapiens , Human Immunodeficiency Virus | VWKEANTTLFCASDAKAYDTEAHNVWATHACVPTDPNPQEVVLENVTENFNMWKNHMVEQMHEDIISLWDQSLKPCVKLTGGVITQACPKISFEPIPIHYCAPAGFAILKCNDKKFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSENFTNNVKNIIVQLNESVQINCTRHNNGGSGSGGDIRQAHCNISREKWQNTLKQIVKKLREQFKNKTIAFAPSSGGDPEIVMHSFNCNGEFFYCNTTKLFTSTWNSTWNSTWNNTEGSNSTVITLPCRIRQIINMWQEVGKAMYAPPIQGQIKCSSNITGLLLTRDGGVDTTKETFRPGGGNMKDNWRSELYKYKVVRIE |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2016-08-24 Deposition Author(s): Gorman, J. , Kwong, P.D. , Wibmer, C.K.