PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

5T1D

Crystal structure of ebv ghgl/gp42/e1d1 complex

PDB DOI: 10.2210/pdb5t1d/pdb

Classification: VIRAL PROTEIN
Organism(s): Epstein-Barr Virus (Strain B95-8) , Epstein-Barr Virus (Strain Gd1) , Mus Musculus

Deposited: 2016-08-18
Deposition Author(s): Jardetzky, T.S. , Sathiyamoorthy, K.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.1 Å

5t1d
Literature

Crystal structure of ebv ghgl/gp42/e1d1 complex

Jardetzky, T.S. , Sathiyamoorthy, K.

Primary Citation of Related Structures: 5T1D


Proteins
Molecule Chains Sequence Length Organism Sequence
Envelope glycoprotein H A 655 Epstein-Barr Virus (Strain B95-8) , Epstein-Barr Virus (Strain Gd1) , Mus Musculus LSEVKLHLDIEGHASHYTIPWTELMAKVPGLSPEALWREANVTEDLASMLNRYKLIYKTSGTLGIALAEPVDIPAVSEGSMQVDASKVHPGVISGLNSPACMLSAPLEKQLFYYIGTMLPNTRPHSYVFYQLRCHLSYVALSINGDKFQYTGAMTSKFLMGTYKRVTEKGDEHVLSLVFGKTKDLPDLRGPFSYPSLTSAQSGDYSLVIVTTFVHYANFHNYFVPNLKDMFSRAVTMTAASYARYVLQKLVLLEMKGGCREPELDTETLTTMFEVSVAFFKVGHAVGETGNGCVDLRWLAKSFFELTVLKDIIGICYGATVKGMQSYGLERLAAMLMATVKMEELGHLTTEKQEYALRLATVGYPKAGVYSGLIGGATSVLLSAYNRHPLFQPLHTVMRETLFIGSHVVLRELRLNVTTQGPNLALYQLLSTALCSALEIGEVLRGLALGTESGLFSPCYLSLRFDLTRDKLLSMAPQEATLDQAAVSNAVDGFLGRLSLEREDRDAWHLPAYKCVDRLDKVLMIIPLINVTFIISSDREVRGSALYEASTTYLSSSLFLSPVIMNKCSQGAVAGEPRQIPKIQNFTRTQKSCIFCGFALLSYDEKEGLETTTYITSQEVQNSILSSNYFDFDNLHVHYLLLTTNGTVMEIAGLY
Envelope glycoprotein L B 112 Epstein-Barr Virus (Strain B95-8) , Epstein-Barr Virus (Strain Gd1) , Mus Musculus WAYPCCHVTQLRAQHLLALENISDIYLVSNQTCDGFSLASLNSPKNGSNQLVISRCANGLNVVSFFISILKRSSSALTGHLRELLTTLETLYGSFSVEDLFGANLNRYAWHR
Glycoprotein 42 C 191 Epstein-Barr Virus (Strain B95-8) , Epstein-Barr Virus (Strain Gd1) , Mus Musculus GGGRVAAAAITWVPKPNVEVWPVDPPPPVNFNKTAEQEYGDKEVKLPHWTPTLHTFQVPQNYTKANCTYCNTREYTFSYKGCCFYFTKKKHTWNGCFQACAELYPCTYFYGPTPDILPVVTRNLNAIESLWVGVYRVGEGNWTSLDGGTFKVYQIFGSHCTYVSKFSTVPVSHHECSFLKPCLCVSQRSNS
E1D1 IgG2a heavy chain H 213 Epstein-Barr Virus (Strain B95-8) , Epstein-Barr Virus (Strain Gd1) , Mus Musculus EVQLEQSGPELVKPGASVKMSCKASGYTFTDYVISWVKQRTGQGLEWIGEIYPESGNTYYNEKFKGEATLTADKSSNTAYMQLSRLTSEDSAVYFCAEGYAMDFWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIV
E1D1 IgG2a light chain L 217 Epstein-Barr Virus (Strain B95-8) , Epstein-Barr Virus (Strain Gd1) , Mus Musculus DIVITQTPLSLPVSLGDQASISCRSSQSLLHSNGNTYLHWYLQRPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLMINRVEAEDLGVYFCSQSIHVPRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-08-18
Deposition Author(s): Jardetzky, T.S. , Sathiyamoorthy, K.