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5SWS

Crystal structure of np2-b17 tcr-h2db-np complex

PDB DOI: 10.2210/pdb5sws/pdb

Classification: IMMUNE SYSTEM
Organism(s): Mus Musculus , Synthetic Construct

Deposited: 2016-08-08
Deposition Author(s): Del Campo, C.M. , Farenc, C. , Gras, S. , Josephs, T.M. , Rossjohn, J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.86 Å

Literature

Crystal structure of np2-b17 tcr-h2db-np complex

Del Campo, C.M. , Farenc, C. , Gras, S. , Josephs, T.M. , Rossjohn, J.

Primary Citation of Related Structures: 5SWS


Proteins
Molecule Chains Sequence Length Organism Sequence
H-2 class I histocompatibility antigen, D-B alpha chain A 280 Mus Musculus , Synthetic Construct GPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPWMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSGCDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQSGAAEHYKAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVTLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVPLGKEQNYTCRVYHEGLPEPLTLRWEPPPST
Beta-2-microglobulin B 99 Mus Musculus , Synthetic Construct IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYACRVKHASMAEPKTVYWDRDM
influenza NP366 epitope C 9 Mus Musculus , Synthetic Construct ASNENMETM
NP1-B17 TCR alpha chain D 207 Mus Musculus , Synthetic Construct QQQVRQSPQSLTVWEGETAILNCSYEDSTFNYFPWYQQFPGEGPALLISIRSVSDKKEDGRFTIFFNKREKKLSLHITDSQPGDSATYFCAASEGSGSWQLIFGSGTQLTVMPNIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFACANAFNNSIIPEDTFFPSPESS
NP1-B17 TCR beta chain E 242 Mus Musculus , Synthetic Construct DTTVKQNPRYKLARVGKPVNLICSQTMNHDTMYWYQKKPNQAPKLLLFYYDKILNREADTFEKFQSSRPNNSFCSLYIGSAGLEYSAMYLCASSAGLDAEQYFGPGTRLLVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-08-08
Deposition Author(s): Del Campo, C.M. , Farenc, C. , Gras, S. , Josephs, T.M. , Rossjohn, J.