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FASTA Sequence PDB Format mmCIF Format
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5ODR

Heterodisulfide reductase / [nife]-hydrogenase complex from methanothermococcus thermolithotrophicus soaked with heterodisulfide for 2 minutes.

PDB DOI: 10.2210/pdb5odr/pdb

Classification: OXIDOREDUCTASE
Organism(s): Methanothermococcus Thermolithotrophicus Dsm 2095

Deposited: 2017-07-06
Deposition Author(s): Ermler, U. , Koch, J. , Shima, S. , Wagner, T.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.2 Å

5odr
Literature

Heterodisulfide reductase / [nife]-hydrogenase complex from methanothermococcus thermolithotrophicus soaked with heterodisulfide for 2 minutes.

Ermler, U. , Koch, J. , Shima, S. , Wagner, T.

Primary Citation of Related Structures: 5ODR


Proteins
Molecule Chains Sequence Length Organism Sequence
Heterodisulfide reductase, subunit A A 654 Methanothermococcus Thermolithotrophicus Dsm 2095 MEEPRIGVYVCHCGVNIGGTVDCPDVTEFAKTLKNVVVARDYKYMCADPGQEMIKKDIKEHNLNRVVVAACSPRLHEPTFRRCVAEAGLNPFLFEFANIREHCSWVHMHEKEKATEKAKDLVRMAVAKARLLEPLEFIKVGVTQRALVIGGGVAGIQTALDLGDMGFETILVEKTPSVGGRMAQLDKTFPTNDCSICILAPKMVDVAKHPNVKLYAYSEVVDVQGYVGNFKVKIMKKARYIDETKCTGCGQCSEVCPIDVPNEFDMGIGMRKAIYKPFPQAVPAKYTIDKEHCIECGLCAKVCGPNAIDFDQEPEIIEAEVGTIICAIGYDAFDPTVREEYGYGVYDNVVTALELERMINASGPTGGKVIRLSDGQKPKRIAFIQCVGSRDAKVGNKYCSNVCCMYAMKNSQLIKEKSPDTEIDIYYMDIRAFSKGYEEFYERSAKQYGIKFMRGRPSQVIEDPETGNLVVRAEDTLLGEILEKEYDLVVLSVGMVPTKSADEVQKILGISRTPDQFFMEAHPKLRPVDTATDGVYLAGACQGPKDIPASVAQGSAAASRAAIPLAKGEVEVEPIIASVDAEICGGCGVCVKQCPYGAPRLVEKDGKVVAEVISALCKGCGTCPAGCPSGALEQDHFKTIQLFKQIEGMFRDTA
Heterodisulfide reductase, subunit A G 654 Methanothermococcus Thermolithotrophicus Dsm 2095 MEEPRIGVYVCHCGVNIGGTVDCPDVTEFAKTLKNVVVARDYKYMCADPGQEMIKKDIKEHNLNRVVVAACSPRLHEPTFRRCVAEAGLNPFLFEFANIREHCSWVHMHEKEKATEKAKDLVRMAVAKARLLEPLEFIKVGVTQRALVIGGGVAGIQTALDLGDMGFETILVEKTPSVGGRMAQLDKTFPTNDCSICILAPKMVDVAKHPNVKLYAYSEVVDVQGYVGNFKVKIMKKARYIDETKCTGCGQCSEVCPIDVPNEFDMGIGMRKAIYKPFPQAVPAKYTIDKEHCIECGLCAKVCGPNAIDFDQEPEIIEAEVGTIICAIGYDAFDPTVREEYGYGVYDNVVTALELERMINASGPTGGKVIRLSDGQKPKRIAFIQCVGSRDAKVGNKYCSNVCCMYAMKNSQLIKEKSPDTEIDIYYMDIRAFSKGYEEFYERSAKQYGIKFMRGRPSQVIEDPETGNLVVRAEDTLLGEILEKEYDLVVLSVGMVPTKSADEVQKILGISRTPDQFFMEAHPKLRPVDTATDGVYLAGACQGPKDIPASVAQGSAAASRAAIPLAKGEVEVEPIIASVDAEICGGCGVCVKQCPYGAPRLVEKDGKVVAEVISALCKGCGTCPAGCPSGALEQDHFKTIQLFKQIEGMFRDTA
Heterodisulfide reductase, subunit B B 291 Methanothermococcus Thermolithotrophicus Dsm 2095 MKYAFFLGCIMPNRYAGVEAATRTVMEKLGVELVDMTGASCCPAPGVFGSFDQKTWLTLAARNLCIAEEMGVDIVTVCNGCYGSLFEAAHLLHDNKEALNFVNEKLDKVGKEYKGNVKVRHFAELIYNDIGVDKIAEKVERPLNINVGVHYGCHFLKPTDVKHLGSAERPVMLDEIVEATGAKSVPYADKMMCCGAGGGVRARELELSLDMTNEKIENMIKAGADCTVNVCPFCHLQFDRGQIEIKEKFGKEYNFPVLHLSQLLGLAMGMDPKDLALSVHQISVDPLLKKI
Heterodisulfide reductase, subunit B H 291 Methanothermococcus Thermolithotrophicus Dsm 2095 MKYAFFLGCIMPNRYAGVEAATRTVMEKLGVELVDMTGASCCPAPGVFGSFDQKTWLTLAARNLCIAEEMGVDIVTVCNGCYGSLFEAAHLLHDNKEALNFVNEKLDKVGKEYKGNVKVRHFAELIYNDIGVDKIAEKVERPLNINVGVHYGCHFLKPTDVKHLGSAERPVMLDEIVEATGAKSVPYADKMMCCGAGGGVRARELELSLDMTNEKIENMIKAGADCTVNVCPFCHLQFDRGQIEIKEKFGKEYNFPVLHLSQLLGLAMGMDPKDLALSVHQISVDPLLKKI
Heterodisulfide reductase, subunit C C 184 Methanothermococcus Thermolithotrophicus Dsm 2095 MIYSSDLNKNLASQIIEAGTPIPGDDVVSSLKACYQCGTCTGSCPSGRRTSYRTRKVIRKALLGMDDVLDSDDIWKCTTCYTCYERCPRDVKVTEIIKTIRNLAAQKGNMAKAHKMTAMYVLKYGHAVPANKNTAELRKSIGLSEKAPIAQFSEKDLNEMNTLIKELGFDELIGFDWEKGALKE
Heterodisulfide reductase, subunit C I 184 Methanothermococcus Thermolithotrophicus Dsm 2095 MIYSSDLNKNLASQIIEAGTPIPGDDVVSSLKACYQCGTCTGSCPSGRRTSYRTRKVIRKALLGMDDVLDSDDIWKCTTCYTCYERCPRDVKVTEIIKTIRNLAAQKGNMAKAHKMTAMYVLKYGHAVPANKNTAELRKSIGLSEKAPIAQFSEKDLNEMNTLIKELGFDELIGFDWEKGALKE
Methyl-viologen reducing hydrogenase, subunit D D 140 Methanothermococcus Thermolithotrophicus Dsm 2095 MSEWEPKIIGFCCNWCTYGGADTAGVGRMQYPPSIRIIRVMCSGRIEPSLILKAFKEGADGVFVGGCHLGDCHYDSGNYKWQRRVMMLYELLEELGIEKERLNHEWISASEGEKFQNTMKDFYNKIEALGPCKLKEELDK
Methyl-viologen reducing hydrogenase, subunit D J 140 Methanothermococcus Thermolithotrophicus Dsm 2095 MSEWEPKIIGFCCNWCTYGGADTAGVGRMQYPPSIRIIRVMCSGRIEPSLILKAFKEGADGVFVGGCHLGDCHYDSGNYKWQRRVMMLYELLEELGIEKERLNHEWISASEGEKFQNTMKDFYNKIEALGPCKLKEELDK
Methyl-viologen reducing hydrogenase, subunit G E 299 Methanothermococcus Thermolithotrophicus Dsm 2095 MVKIATTWLGGCSGCHISLLDLHEELLNLLENVELVHCPVLMDVKEIPDEVEVALIEGGIRNEENLEIAKEMRERAKIVIAFGTCAAFGGVPGLGNLYSNDELLDKAYKTTITTKNDDGIIPNEEVPELVSRVKPLSEVIEVDYFIPGCPPNPEMIAEVVKALLEGKEPELPKKNLCEECARKKSEEGVAIETIKRNYEGNPDPEKCLLEQGYICLGIATREGCGAPCPSSGVPCSGCSGPTDAVVDQGAKMISALCSDFGIDNDRDVDPMILPKSIKDKIGSFYKFTLPSAFVPIRLK
Methyl-viologen reducing hydrogenase, subunit G K 299 Methanothermococcus Thermolithotrophicus Dsm 2095 MVKIATTWLGGCSGCHISLLDLHEELLNLLENVELVHCPVLMDVKEIPDEVEVALIEGGIRNEENLEIAKEMRERAKIVIAFGTCAAFGGVPGLGNLYSNDELLDKAYKTTITTKNDDGIIPNEEVPELVSRVKPLSEVIEVDYFIPGCPPNPEMIAEVVKALLEGKEPELPKKNLCEECARKKSEEGVAIETIKRNYEGNPDPEKCLLEQGYICLGIATREGCGAPCPSSGVPCSGCSGPTDAVVDQGAKMISALCSDFGIDNDRDVDPMILPKSIKDKIGSFYKFTLPSAFVPIRLK
Methyl-viologen reducing hydrogenase, subunit A F 473 Methanothermococcus Thermolithotrophicus Dsm 2095 MVKLSVEPVTRVEGHGKISVSFDDSGNLDKVRFHVVEVRGFEKFLEGRYVEDAPIYTPRICGICQVAHHLASAKAVDNVFGVKIPETAELLRNLMHQGATVHSHALHFYMLAAPDLMFPTTDDVLKRNLMGIAKEHPEIIKDAIELRKAGQNVVRVVGGRAIHPVTAVVGGQSKSLKEEERDELLKLSERTIELSEKSIEVGKKLLENIKDEDLLDIGYFESAHMGMVNNGVHDLYDGKLRVVNSEGKVEYEFDPSEYMNYIAEGVKPYSYLKFPYLKDKGEEDGIYRVNTLSRLNVSDKMATPLAQKYYDEFVKEFGKPCHHPMLFHYARLIELLSSAEMVKELLENDKIVGEDIRAEPEEVVGDGVGCVEAPRGTLIHHFKTDDDGIITDTNLVVATVQNNPAMDIGVRKVAEKYIKAPEDATPQVLNYMEMLIRAYDPCLSCATHIIGEESNNLSLDVYQKNKLVKSIRG
Methyl-viologen reducing hydrogenase, subunit A L 473 Methanothermococcus Thermolithotrophicus Dsm 2095 MVKLSVEPVTRVEGHGKISVSFDDSGNLDKVRFHVVEVRGFEKFLEGRYVEDAPIYTPRICGICQVAHHLASAKAVDNVFGVKIPETAELLRNLMHQGATVHSHALHFYMLAAPDLMFPTTDDVLKRNLMGIAKEHPEIIKDAIELRKAGQNVVRVVGGRAIHPVTAVVGGQSKSLKEEERDELLKLSERTIELSEKSIEVGKKLLENIKDEDLLDIGYFESAHMGMVNNGVHDLYDGKLRVVNSEGKVEYEFDPSEYMNYIAEGVKPYSYLKFPYLKDKGEEDGIYRVNTLSRLNVSDKMATPLAQKYYDEFVKEFGKPCHHPMLFHYARLIELLSSAEMVKELLENDKIVGEDIRAEPEEVVGDGVGCVEAPRGTLIHHFKTDDDGIITDTNLVVATVQNNPAMDIGVRKVAEKYIKAPEDATPQVLNYMEMLIRAYDPCLSCATHIIGEESNNLSLDVYQKNKLVKSIRG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-07-06
Deposition Author(s): Ermler, U. , Koch, J. , Shima, S. , Wagner, T.