5O05
Gii.10 vietnam 026 norovirus protruding domain in complex with nanobody nano-42
PDB DOI: 10.2210/pdb5o05/pdb
Classification: VIRAL PROTEIN Organism(s): Norwalk Virus , Vicugna Pacos
Deposited: 2017-05-16 Deposition Author(s): Hansman, G.S. , Koromyslova, A.D.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2 Å
Gii.10 vietnam 026 norovirus protruding domain in complex with nanobody nano-42
Hansman, G.S. , Koromyslova, A.D.
Primary Citation of Related Structures: 5O05
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Nanobody (VHH) Nano-42 | C | 120 | Norwalk Virus , Vicugna Pacos | QVQLQESGGGLVQPGGSLRLSCAASGSVSRTYVMGWYRQTPGNQRELVATITSVGSTNYADSLKGRFTISRENAENTVYLQMNSLKPEDTAIYYCKYIRYSPIHAPLDYWGQGTQVTVSS |
| Nanobody (VHH) Nano-42 | D | 120 | Norwalk Virus , Vicugna Pacos | QVQLQESGGGLVQPGGSLRLSCAASGSVSRTYVMGWYRQTPGNQRELVATITSVGSTNYADSLKGRFTISRENAENTVYLQMNSLKPEDTAIYYCKYIRYSPIHAPLDYWGQGTQVTVSS |
| Capsid protein | A | 315 | Norwalk Virus , Vicugna Pacos | SKPFTLPILTLGELTNSRFPLPIDVLYTNPNESAIVQCQNGRCTLDGELQGTTQLLPTGICAFRGKVTQQVQDEHRGTHWNMTVTNLNGTPFDPTEDVPAPLGTPDFSGQIYGVISQRNTNTVPGEGNLPANRAHEAVIATYSPKFTPKLGNIQFSTWETQDVSSGQPTKFTPVGLASVDANSHFDQWTLPSYSGALTLNMNLAPSVAPVFPGECLLFFRSFIPLKGGYGNPAIDCLMPQEWVQHLYQESAPSLSDVALVRYVNPETGRTLFEAKLHRNGFLTVARNSAGPVVAPTNGYFRFDSWVNQFYTLAPM |
| Capsid protein | B | 315 | Norwalk Virus , Vicugna Pacos | SKPFTLPILTLGELTNSRFPLPIDVLYTNPNESAIVQCQNGRCTLDGELQGTTQLLPTGICAFRGKVTQQVQDEHRGTHWNMTVTNLNGTPFDPTEDVPAPLGTPDFSGQIYGVISQRNTNTVPGEGNLPANRAHEAVIATYSPKFTPKLGNIQFSTWETQDVSSGQPTKFTPVGLASVDANSHFDQWTLPSYSGALTLNMNLAPSVAPVFPGECLLFFRSFIPLKGGYGNPAIDCLMPQEWVQHLYQESAPSLSDVALVRYVNPETGRTLFEAKLHRNGFLTVARNSAGPVVAPTNGYFRFDSWVNQFYTLAPM |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2017-05-16 Deposition Author(s): Hansman, G.S. , Koromyslova, A.D.