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5O04

Gii.10 vietnam 026 norovirus protruding domain in complex with nanobody nano-26 and nano-85

PDB DOI: 10.2210/pdb5o04/pdb

Classification: VIRAL PROTEIN
Organism(s): Norwalk Virus , Vicugna Pacos

Deposited: 2017-05-16
Deposition Author(s): Hansman, A.D. , Koromyslova, A.D.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.3 Å

Literature

Gii.10 vietnam 026 norovirus protruding domain in complex with nanobody nano-26 and nano-85

Hansman, A.D. , Koromyslova, A.D.

Primary Citation of Related Structures: 5O04


Proteins
Molecule Chains Sequence Length Organism Sequence
Capsid protein A 315 Norwalk Virus , Vicugna Pacos SKPFTLPILTLGELTNSRFPLPIDVLYTNPNESAIVQCQNGRCTLDGELQGTTQLLPTGICAFRGKVTQQVQDEHRGTHWNMTVTNLNGTPFDPTEDVPAPLGTPDFSGQIYGVISQRNTNTVPGEGNLPANRAHEAVIATYSPKFTPKLGNIQFSTWETQDVSSGQPTKFTPVGLASVDANSHFDQWTLPSYSGALTLNMNLAPSVAPVFPGECLLFFRSFIPLKGGYGNPAIDCLMPQEWVQHLYQESAPSLSDVALVRYVNPETGRTLFEAKLHRNGFLTVARNSAGPVVAPTNGYFRFDSWVNQFYTLAPM
Capsid protein B 315 Norwalk Virus , Vicugna Pacos SKPFTLPILTLGELTNSRFPLPIDVLYTNPNESAIVQCQNGRCTLDGELQGTTQLLPTGICAFRGKVTQQVQDEHRGTHWNMTVTNLNGTPFDPTEDVPAPLGTPDFSGQIYGVISQRNTNTVPGEGNLPANRAHEAVIATYSPKFTPKLGNIQFSTWETQDVSSGQPTKFTPVGLASVDANSHFDQWTLPSYSGALTLNMNLAPSVAPVFPGECLLFFRSFIPLKGGYGNPAIDCLMPQEWVQHLYQESAPSLSDVALVRYVNPETGRTLFEAKLHRNGFLTVARNSAGPVVAPTNGYFRFDSWVNQFYTLAPM
Nanobody (VHH) Nano-26 E 115 Norwalk Virus , Vicugna Pacos QVQLQESGGGLVQPGGSLRLSCTAPRIIFFMYDVGWYRQAPEKQRELVAQINSDVSTKYADSVKGRFTISRDNAKRTVYLQMNDLKPEDAAVYYCNVRRASADYWGQGTQVTVSS
Nanobody (VHH) Nano-26 F 115 Norwalk Virus , Vicugna Pacos QVQLQESGGGLVQPGGSLRLSCTAPRIIFFMYDVGWYRQAPEKQRELVAQINSDVSTKYADSVKGRFTISRDNAKRTVYLQMNDLKPEDAAVYYCNVRRASADYWGQGTQVTVSS
Nanobody (VHH) Nano-85 D 125 Norwalk Virus , Vicugna Pacos QVQLQESGGGLVQPGGSLRLSCAASGSIFSIYAMGWYRQAPGKQRELVASISSGGGTNYADSVKGRFTISGDNAKNTVYLQMNSLKPEDTAVYYCKREDYSAYAPPSGSRGRGTQVTVSSHHHHH
Nanobody (VHH) Nano-85 C 125 Norwalk Virus , Vicugna Pacos QVQLQESGGGLVQPGGSLRLSCAASGSIFSIYAMGWYRQAPGKQRELVASISSGGGTNYADSVKGRFTISGDNAKNTVYLQMNSLKPEDTAVYYCKREDYSAYAPPSGSRGRGTQVTVSSHHHHH
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-05-16
Deposition Author(s): Hansman, A.D. , Koromyslova, A.D.