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FASTA Sequence PDB Format mmCIF Format
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5NBM

Crystal structure of the arp4-n-actin(atp-state) heterodimer bound by a nanobody

PDB DOI: 10.2210/pdb5nbm/pdb

Classification: HYDROLASE
Organism(s): Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Trichoplusia Ni , Vicugna Pacos

Deposited: 2017-03-02
Deposition Author(s): Eustermann, S. , Hopfner, K.P. , Knoll, K.R.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.4 Å

5nbm
Literature

Crystal structure of the arp4-n-actin(atp-state) heterodimer bound by a nanobody

Eustermann, S. , Hopfner, K.P. , Knoll, K.R.

Primary Citation of Related Structures: 5NBM


Proteins
Molecule Chains Sequence Length Organism Sequence
Actin-related protein 4 A 489 Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Trichoplusia Ni , Vicugna Pacos MSNAALQVYGGDEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGKYTADEGNKKIFSEQSIGIPRKDYELKPIIENGLVIDWDTAQEQWQWALQNELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRPNCLVVDIGHDTCSVSPIVDGMTLSKSTRRNFIAGKFINHLIKKALEPKEIIPLFAIKQRKPEFIKKTFDYEVDKSLYDYANNRGFFQECKETLCHICPTKTLEETKTELSSTAKRSIESPWNEEIVFDNETRYGFAEELFLPKEDDIPANWPRSNSGVVKTWRNDYVPLKRTKPSGVNKSDKKVTPTEEKEQEAVSKSTSPAANSADTPNETGKRPLEEEKPPKENNELIGLADLVYSSIMSSDVDLRATLAHNVVLTGGTSSIPGLSDRLMTELNKILPSLKFRILTTGHTIERQYQSWLGGSILTSLGTFHQLWVGKKEYEEVGVERLLNDRFR
Actin-related protein 4 B 489 Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Trichoplusia Ni , Vicugna Pacos MSNAALQVYGGDEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGKYTADEGNKKIFSEQSIGIPRKDYELKPIIENGLVIDWDTAQEQWQWALQNELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRPNCLVVDIGHDTCSVSPIVDGMTLSKSTRRNFIAGKFINHLIKKALEPKEIIPLFAIKQRKPEFIKKTFDYEVDKSLYDYANNRGFFQECKETLCHICPTKTLEETKTELSSTAKRSIESPWNEEIVFDNETRYGFAEELFLPKEDDIPANWPRSNSGVVKTWRNDYVPLKRTKPSGVNKSDKKVTPTEEKEQEAVSKSTSPAANSADTPNETGKRPLEEEKPPKENNELIGLADLVYSSIMSSDVDLRATLAHNVVLTGGTSSIPGLSDRLMTELNKILPSLKFRILTTGHTIERQYQSWLGGSILTSLGTFHQLWVGKKEYEEVGVERLLNDRFR
Actin C 375 Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Trichoplusia Ni , Vicugna Pacos MDSEVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRGILTLRYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKSNREKMTQIMFETFNVPAFYVSIQAVLSLYSSGRTTGIVLDSGDGVTHVVPIYAGFSLPHAILRIDLAGRDLTDYLMKILSERGYSFSTTAEREIVRDIKEKLCYVALDFEQEMQTAAQSSSIEKSYELPDGQVITIGNERFRAPEALFHPSVLGLESAGIDQTTYNSIMKCDVDVRKELYGNIVMSGGTTMFPGIAERMQKEITALAPSSMKVKIIAPPERKYSVWIGGSILASLTTFQQMWISKQEYDESGPSIVHHKCF
Actin D 375 Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Trichoplusia Ni , Vicugna Pacos MDSEVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRGILTLRYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKSNREKMTQIMFETFNVPAFYVSIQAVLSLYSSGRTTGIVLDSGDGVTHVVPIYAGFSLPHAILRIDLAGRDLTDYLMKILSERGYSFSTTAEREIVRDIKEKLCYVALDFEQEMQTAAQSSSIEKSYELPDGQVITIGNERFRAPEALFHPSVLGLESAGIDQTTYNSIMKCDVDVRKELYGNIVMSGGTTMFPGIAERMQKEITALAPSSMKVKIIAPPERKYSVWIGGSILASLTTFQQMWISKQEYDESGPSIVHHKCF
nAct-Nanobody E 159 Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Trichoplusia Ni , Vicugna Pacos MAQVQLVESGGGSVQAGDSLRLSCTASGRTFTNYGMGWFRQAPGKEREFVAAIGRFGFPLYYSDSVKGRFTISRDNAKTTVYLQMHNLKPEDTAIYFCAARNPRATAEDVSAYDYWGQGTQVTVSSKGSSAWSHPQFEKGGGSGGGSGGSAWSHPQFEK
nAct-Nanobody F 159 Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Trichoplusia Ni , Vicugna Pacos MAQVQLVESGGGSVQAGDSLRLSCTASGRTFTNYGMGWFRQAPGKEREFVAAIGRFGFPLYYSDSVKGRFTISRDNAKTTVYLQMHNLKPEDTAIYFCAARNPRATAEDVSAYDYWGQGTQVTVSSKGSSAWSHPQFEKGGGSGGGSGGSAWSHPQFEK
Unknown peptide G 17 Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Trichoplusia Ni , Vicugna Pacos XXXXXXXXXXXXXXXXX
Unknown peptide H 17 Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Trichoplusia Ni , Vicugna Pacos XXXXXXXXXXXXXXXXX
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-03-02
Deposition Author(s): Eustermann, S. , Hopfner, K.P. , Knoll, K.R.