5N7B
Understanding the singular conformational landscape of the tn antigens: sulfur-for- oxygen substitution in the glycosidic linkage provides new insights into molecular recognition by an antibody
PDB DOI: 10.2210/pdb5n7b/pdb
Classification: IMMUNE SYSTEM Organism(s): Enterobacter Aerogenes , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2017-02-20 Deposition Author(s): Avenoza, A. , Bernardes, G.J.L. , Busto, J.H. , Castro-Lopez, J. , Companon, I. , Corzana, F. , Hurtado-Guerrero, R. , Jimenez-Barbero, J. , Jimenez-Oses, G. , Martinez-Saez, N. , Peregrina, J.M.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 1.7 Å
Understanding the singular conformational landscape of the tn antigens: sulfur-for- oxygen substitution in the glycosidic linkage provides new insights into molecular recognition by an antibody
Avenoza, A. , Bernardes, G.J.L. , Busto, J.H. , Castro-Lopez, J. , Companon, I. , Corzana, F. , Hurtado-Guerrero, R. , Jimenez-Barbero, J. , Jimenez-Oses, G. , Martinez-Saez, N. , Peregrina, J.M.
Primary Citation of Related Structures: 5N7B
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Ig heavy chain V-III region J606,Ig lambda-1 chain V region S43 | H | 244 | Enterobacter Aerogenes , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | QVQLQESGGGLVQPGGSMKLSCVASGFTFSNYWMNWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMNNLRAEDTGIYYCTGVGQFAYWGQGTTVTVSSSSGGGGSGGGGGSSGSSDIVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIYFCALWYSNHWVFGGGTKLTVLG |
| APD(CG6)RP(NH2) peptide | I | 7 | Enterobacter Aerogenes , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | APDCRPX |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2017-02-20 Deposition Author(s): Avenoza, A. , Bernardes, G.J.L. , Busto, J.H. , Castro-Lopez, J. , Companon, I. , Corzana, F. , Hurtado-Guerrero, R. , Jimenez-Barbero, J. , Jimenez-Oses, G. , Martinez-Saez, N. , Peregrina, J.M.