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5MMB

Crystal structure of the prototype foamy virus (pfv) intasome in complex with magnesium and the insti xz434 (compound 6p)

PDB DOI: 10.2210/pdb5mmb/pdb

Classification: VIRAL PROTEIN
Organism(s): Human Spumaretrovirus , Synthetic Construct

Deposited: 2016-12-09
Deposition Author(s): Cherepanov, P. , Maskell, D.P. , Pye, V.E.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.77 Å

5mmb
Literature

Crystal structure of the prototype foamy virus (pfv) intasome in complex with magnesium and the insti xz434 (compound 6p)

Cherepanov, P. , Maskell, D.P. , Pye, V.E.

Primary Citation of Related Structures: 5MMB


Proteins
Molecule Chains Sequence Length Organism Sequence
PFV INTEGRASE A 395 Human Spumaretrovirus , Synthetic Construct GPGCNTKKPNLDAELDQLLQGHYIKGYPKQYTYFLEDGKVKVSRPEGVKIIPPQSDRQKIVLQAHNLAHTGREATLLKIANLYWWPNMRKDVVKQLGRCQQCLITNASNKASGPILRPDRPQKPFDKFFIDYIGPLPPSQGYLYVLVVVDGMTGFTWLYPTKAPSTSATVKSLNVLTSIAIPKVIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYHPQSSGKVERKNSDIKRLLTKLLVGRPTKWYDLLPVVQLALNNTYSPVLKYTPHQLLFGIDSNTPFANQDTLDLTREEELSLLQEIRTSLYHPSTPPASSRSWSPVVGQLVQERVARPASLRPRWHKPSTVLKVLNPRTVVILDHLGNNRTVSIDNLKPTSHQNGTTNDTATMDHLEKNE
PFV INTEGRASE B 395 Human Spumaretrovirus , Synthetic Construct GPGCNTKKPNLDAELDQLLQGHYIKGYPKQYTYFLEDGKVKVSRPEGVKIIPPQSDRQKIVLQAHNLAHTGREATLLKIANLYWWPNMRKDVVKQLGRCQQCLITNASNKASGPILRPDRPQKPFDKFFIDYIGPLPPSQGYLYVLVVVDGMTGFTWLYPTKAPSTSATVKSLNVLTSIAIPKVIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYHPQSSGKVERKNSDIKRLLTKLLVGRPTKWYDLLPVVQLALNNTYSPVLKYTPHQLLFGIDSNTPFANQDTLDLTREEELSLLQEIRTSLYHPSTPPASSRSWSPVVGQLVQERVARPASLRPRWHKPSTVLKVLNPRTVVILDHLGNNRTVSIDNLKPTSHQNGTTNDTATMDHLEKNE

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3') c 19 NA ATTGTCATGGAATTTCGCA
DNA (5'-D(*TP*GP*CP*GP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3') d 17 NA TGCGAAATTCCATGACA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-12-09
Deposition Author(s): Cherepanov, P. , Maskell, D.P. , Pye, V.E.