5MHK
Icp4 dna-binding domain in complex with 19mer dna duplex from its own promoter
PDB DOI: 10.2210/pdb5mhk/pdb
Classification: TRANSCRIPTION Organism(s): Burkholderia Pseudomallei 1026B , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2016-11-24 Deposition Author(s): Baldock, C. , Golovanov, A.P. , Jowitt, T.A. , Levy, C. , Lockhart-Cairns, M.P. , Mould, P. , Sandri-Goldin, R.M. , Sito, H. , Tunnicliffe, R.B.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.28 Å
Icp4 dna-binding domain in complex with 19mer dna duplex from its own promoter
Baldock, C. , Golovanov, A.P. , Jowitt, T.A. , Levy, C. , Lockhart-Cairns, M.P. , Mould, P. , Sandri-Goldin, R.M. , Sito, H. , Tunnicliffe, R.B.
Primary Citation of Related Structures: 5MHK
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(*GP*CP*TP*CP*CP*GP*TP*GP*TP*GP*GP*AP*CP*GP*AP*TP*CP*GP*G)-3') | g | 19 | NA | GCTCCGTGTGGACGATCGG |
| DNA (5'-D(*GP*CP*TP*CP*CP*GP*TP*GP*TP*GP*GP*AP*CP*GP*AP*TP*CP*GP*G)-3') | e | 19 | NA | GCTCCGTGTGGACGATCGG |
| DNA (5'-D(*GP*CP*TP*CP*CP*GP*TP*GP*TP*GP*GP*AP*CP*GP*AP*TP*CP*GP*G)-3') | h | 19 | NA | CCGATCGTCCACACGGAGC |
| DNA (5'-D(*GP*CP*TP*CP*CP*GP*TP*GP*TP*GP*GP*AP*CP*GP*AP*TP*CP*GP*G)-3') | f | 19 | NA | CCGATCGTCCACACGGAGC |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| RS1 | A | 231 | Burkholderia Pseudomallei 1026B , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | GPAASAGRIERRRARAAVAGRDATGRFTAGQPRRVELDADATSGAFYARYRDGYVSGEPWPGAGPPPPGRVLYGGLGDSRPGLWGAPEAEEARRRFEASGAPAAVWAPELGDAAQQYALITRLLYTPDAEAMGWLQNPRVVPGDVALDQACFRISGAARNSSSFITGSVARAVPHLGYAMAAGRFGWGLAHAAAAVAMSRRYDRAQKGFLLTSLRRAYAPLLARENAALTG |
| RS1 | C | 231 | Burkholderia Pseudomallei 1026B , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | GPAASAGRIERRRARAAVAGRDATGRFTAGQPRRVELDADATSGAFYARYRDGYVSGEPWPGAGPPPPGRVLYGGLGDSRPGLWGAPEAEEARRRFEASGAPAAVWAPELGDAAQQYALITRLLYTPDAEAMGWLQNPRVVPGDVALDQACFRISGAARNSSSFITGSVARAVPHLGYAMAAGRFGWGLAHAAAAVAMSRRYDRAQKGFLLTSLRRAYAPLLARENAALTG |
| RS1 | D | 231 | Burkholderia Pseudomallei 1026B , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | GPAASAGRIERRRARAAVAGRDATGRFTAGQPRRVELDADATSGAFYARYRDGYVSGEPWPGAGPPPPGRVLYGGLGDSRPGLWGAPEAEEARRRFEASGAPAAVWAPELGDAAQQYALITRLLYTPDAEAMGWLQNPRVVPGDVALDQACFRISGAARNSSSFITGSVARAVPHLGYAMAAGRFGWGLAHAAAAVAMSRRYDRAQKGFLLTSLRRAYAPLLARENAALTG |
| RS1 | B | 231 | Burkholderia Pseudomallei 1026B , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | GPAASAGRIERRRARAAVAGRDATGRFTAGQPRRVELDADATSGAFYARYRDGYVSGEPWPGAGPPPPGRVLYGGLGDSRPGLWGAPEAEEARRRFEASGAPAAVWAPELGDAAQQYALITRLLYTPDAEAMGWLQNPRVVPGDVALDQACFRISGAARNSSSFITGSVARAVPHLGYAMAAGRFGWGLAHAAAAVAMSRRYDRAQKGFLLTSLRRAYAPLLARENAALTG |
| ICP4 DNA BINDING DOMAIN | J | 4 | Burkholderia Pseudomallei 1026B , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | FTAG |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2016-11-24 Deposition Author(s): Baldock, C. , Golovanov, A.P. , Jowitt, T.A. , Levy, C. , Lockhart-Cairns, M.P. , Mould, P. , Sandri-Goldin, R.M. , Sito, H. , Tunnicliffe, R.B.