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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

5M59

Crystal structure of chaetomium thermophilum brr2 helicase core in complex with prp8 jab1 domain

PDB DOI: 10.2210/pdb5m59/pdb

Classification: SPLICING
Organism(s): Chaetomium Thermophilum

Deposited: 2016-10-20
Deposition Author(s): Absmeier, E. , Becke, C. , Santos, K.F. , Wahl, M.C. , Wollenhaupt, J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.2 Å

5m59
Literature

Crystal structure of chaetomium thermophilum brr2 helicase core in complex with prp8 jab1 domain

Absmeier, E. , Becke, C. , Santos, K.F. , Wahl, M.C. , Wollenhaupt, J.

Primary Citation of Related Structures: 5M59


Proteins
Molecule Chains Sequence Length Organism Sequence
Putative pre-mRNA splicing factor B 276 Chaetomium Thermophilum GAMQQTFASKTEWRTRAIATSNLRTRANNMYVAPVDNDVDDITYVMPKNILKKFITIADLRVQVAGFLYGCSPADNDQVKEIRCIVMVPQIGGNRSVQLPQHLPQHEMLKGLEPLGLIHTMAGNELPYMSPADVTTHAKLVDAHPSWKNQNTLTVTVAFTPGSVSLSAWALTPLGYKWGVENKDPNVDNPQGFTTTMGERRQLLLSDKFKGFFLVPDTGKWNYSFMGSSFSGIEKKPYHVKLDTPLPFYSEQHRPIHFTSFNELEDIWVDRADNFA
Putative pre-mRNA splicing factor D 276 Chaetomium Thermophilum GAMQQTFASKTEWRTRAIATSNLRTRANNMYVAPVDNDVDDITYVMPKNILKKFITIADLRVQVAGFLYGCSPADNDQVKEIRCIVMVPQIGGNRSVQLPQHLPQHEMLKGLEPLGLIHTMAGNELPYMSPADVTTHAKLVDAHPSWKNQNTLTVTVAFTPGSVSLSAWALTPLGYKWGVENKDPNVDNPQGFTTTMGERRQLLLSDKFKGFFLVPDTGKWNYSFMGSSFSGIEKKPYHVKLDTPLPFYSEQHRPIHFTSFNELEDIWVDRADNFA
Putative pre-mRNA splicing factor F 276 Chaetomium Thermophilum GAMQQTFASKTEWRTRAIATSNLRTRANNMYVAPVDNDVDDITYVMPKNILKKFITIADLRVQVAGFLYGCSPADNDQVKEIRCIVMVPQIGGNRSVQLPQHLPQHEMLKGLEPLGLIHTMAGNELPYMSPADVTTHAKLVDAHPSWKNQNTLTVTVAFTPGSVSLSAWALTPLGYKWGVENKDPNVDNPQGFTTTMGERRQLLLSDKFKGFFLVPDTGKWNYSFMGSSFSGIEKKPYHVKLDTPLPFYSEQHRPIHFTSFNELEDIWVDRADNFA
Putative pre-mRNA splicing factor H 276 Chaetomium Thermophilum GAMQQTFASKTEWRTRAIATSNLRTRANNMYVAPVDNDVDDITYVMPKNILKKFITIADLRVQVAGFLYGCSPADNDQVKEIRCIVMVPQIGGNRSVQLPQHLPQHEMLKGLEPLGLIHTMAGNELPYMSPADVTTHAKLVDAHPSWKNQNTLTVTVAFTPGSVSLSAWALTPLGYKWGVENKDPNVDNPQGFTTTMGERRQLLLSDKFKGFFLVPDTGKWNYSFMGSSFSGIEKKPYHVKLDTPLPFYSEQHRPIHFTSFNELEDIWVDRADNFA
Pre-mRNA splicing helicase-like protein A 1772 Chaetomium Thermophilum GAEFMDIDKDAFAAKEQALKQERPEGLVGGLQPKKLVNLENLVFDQGNHLMTNPRVRMPEGTTKRVFKGYEEIHVPPPKKRSDPTDQNIPVTELPEWARIPFNTTKTLNKIQSKCFPTAFLDDGNMLVCAPTGSGKTNVAMLTMLREIGKNRNEKGEIDLDAFKIVYIAPLKALVQEQVGNFGKRLEPYGIKVSELTGDRQLTKQQISETQVIVTTPEKWDVITRKATDISYTNLVRLIIIDEIHLLHDDRGPVLESIVSRTIRRTEQTGEPVRIIGLSATLPNYRDVASFLRVDFEKGLFYFDGSYRPCPLRQEFIGVTDKKAIKQLKTMNDITYQKVLEHVGQNRNQMLIFVHSRKETAKTAKYIRDKALEMDTINQILKHDAGTREVLQEAASSVNNTDLKDLLPYGFGIHHAGMSRADRTDVEDLFASGHIQVLVCTATLAWGVNLPAHTVIIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQYDTYGEGIIITTQGEIPYYLSLLNQQLPIESQLVSKLVDSLNAEIVLGNVRNRDEGVEWLGYTYLFVRMLRSPGLYSVGAEYEDDVALEQKRVDLIHSAAMVLKKSNLIKYDEKTGKMQATELGRIASHYYISHESMDTYNKLIHPAMNDVELFRVFAQSGEFKYIPVRQEEKLELAKLLARVPIPVKESIEEPTAKINVLLQAYISRLKLEGLALMADMVYVTQSAGRILRAIFEICLKKGWASVAKLALNMCKMAEKRMWPTMSPLRQYPTCPAEIIKKAERMDVPWSSYFDLDPPRMGELLGMPKAGKTVCALVSKFPRVEIQGNVQPMTRSMLRIELTITPNFQWDVELHGVTESFWILVEDCDGEEILFHDVFILRKDLAEAEENEHTVEFTVPISEPMPPNYFISVISDRWMHSETRMPVSFQKLILPERFPPHTELLDLQPLPVSALKAKDYAALYPNWQQFNKIQTQTFNSLYNTDNNVLVAAPTGSGKTVCAEFALLRHWAKKDAGRAVYIAPFQELVDLRFQDWQKRLSHLRGGKEIVKLTGETTTDLKLLEQGDLILATPLQWDVLSRQWKRRKNVQTVELFIADDLHMLGGQMGYIYEIVVSRMHFIRTQTELPMRIVGLSVSLANARDIGEWIDAKKHDIYNFSPHVRPVPLELHIQSYTIPHFPSLMLAMAKPTYLAITQLSPDQPAIVFVPSRKQTRATARDLLTACLADDDEDRFLHVEVDQIRKLLDHVQEEALAEALSHGVGYYHEALSQSDKRIVKHLYNNGAIQVLIASRDVCWELDFTAHLVVVMGTQFFEGKEHRYIDYPLSEVLQMFGKALQPSKDGRSRGVLMLPAVKREYYKKFLNEALPVESHLHNFLPDAFVTEISTKMIESGEDAINWATFTYFYRRLLANPSYYGLQDPTHDGLSQYLSDLVETTLKQLSDARIIEMDEDEGTVAPLNAAMIAAYYNISYMTMEMFLLSLSHKSKLRTILEIVTAATEFESIQTRRHEEGILKRIYDHVPVKMNNPVWDSAHFKAFVLVQAHFSRMNLPIDLAKDQEVILQKILSLLSAIVDILSSEGHLNALNAMEMSQMVVQAMWDRDSPLKQIPNFTPEVVKVANKYGINDIFDFMEQMNPEENPNYASLVKDLGLTQAQLAQAANFTNNKYPDITLEFEVDDPDNIRAGEPAYLKIHIERELEEDEEFDPTVHAPFYPGKKSENWWLVVGEESTKTLLAIKRVTVGKELNVKLEFVVPSPGKHDLKLFLMSDSYVGVDQDPSFSVNVAEG
Pre-mRNA splicing helicase-like protein C 1772 Chaetomium Thermophilum GAEFMDIDKDAFAAKEQALKQERPEGLVGGLQPKKLVNLENLVFDQGNHLMTNPRVRMPEGTTKRVFKGYEEIHVPPPKKRSDPTDQNIPVTELPEWARIPFNTTKTLNKIQSKCFPTAFLDDGNMLVCAPTGSGKTNVAMLTMLREIGKNRNEKGEIDLDAFKIVYIAPLKALVQEQVGNFGKRLEPYGIKVSELTGDRQLTKQQISETQVIVTTPEKWDVITRKATDISYTNLVRLIIIDEIHLLHDDRGPVLESIVSRTIRRTEQTGEPVRIIGLSATLPNYRDVASFLRVDFEKGLFYFDGSYRPCPLRQEFIGVTDKKAIKQLKTMNDITYQKVLEHVGQNRNQMLIFVHSRKETAKTAKYIRDKALEMDTINQILKHDAGTREVLQEAASSVNNTDLKDLLPYGFGIHHAGMSRADRTDVEDLFASGHIQVLVCTATLAWGVNLPAHTVIIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQYDTYGEGIIITTQGEIPYYLSLLNQQLPIESQLVSKLVDSLNAEIVLGNVRNRDEGVEWLGYTYLFVRMLRSPGLYSVGAEYEDDVALEQKRVDLIHSAAMVLKKSNLIKYDEKTGKMQATELGRIASHYYISHESMDTYNKLIHPAMNDVELFRVFAQSGEFKYIPVRQEEKLELAKLLARVPIPVKESIEEPTAKINVLLQAYISRLKLEGLALMADMVYVTQSAGRILRAIFEICLKKGWASVAKLALNMCKMAEKRMWPTMSPLRQYPTCPAEIIKKAERMDVPWSSYFDLDPPRMGELLGMPKAGKTVCALVSKFPRVEIQGNVQPMTRSMLRIELTITPNFQWDVELHGVTESFWILVEDCDGEEILFHDVFILRKDLAEAEENEHTVEFTVPISEPMPPNYFISVISDRWMHSETRMPVSFQKLILPERFPPHTELLDLQPLPVSALKAKDYAALYPNWQQFNKIQTQTFNSLYNTDNNVLVAAPTGSGKTVCAEFALLRHWAKKDAGRAVYIAPFQELVDLRFQDWQKRLSHLRGGKEIVKLTGETTTDLKLLEQGDLILATPLQWDVLSRQWKRRKNVQTVELFIADDLHMLGGQMGYIYEIVVSRMHFIRTQTELPMRIVGLSVSLANARDIGEWIDAKKHDIYNFSPHVRPVPLELHIQSYTIPHFPSLMLAMAKPTYLAITQLSPDQPAIVFVPSRKQTRATARDLLTACLADDDEDRFLHVEVDQIRKLLDHVQEEALAEALSHGVGYYHEALSQSDKRIVKHLYNNGAIQVLIASRDVCWELDFTAHLVVVMGTQFFEGKEHRYIDYPLSEVLQMFGKALQPSKDGRSRGVLMLPAVKREYYKKFLNEALPVESHLHNFLPDAFVTEISTKMIESGEDAINWATFTYFYRRLLANPSYYGLQDPTHDGLSQYLSDLVETTLKQLSDARIIEMDEDEGTVAPLNAAMIAAYYNISYMTMEMFLLSLSHKSKLRTILEIVTAATEFESIQTRRHEEGILKRIYDHVPVKMNNPVWDSAHFKAFVLVQAHFSRMNLPIDLAKDQEVILQKILSLLSAIVDILSSEGHLNALNAMEMSQMVVQAMWDRDSPLKQIPNFTPEVVKVANKYGINDIFDFMEQMNPEENPNYASLVKDLGLTQAQLAQAANFTNNKYPDITLEFEVDDPDNIRAGEPAYLKIHIERELEEDEEFDPTVHAPFYPGKKSENWWLVVGEESTKTLLAIKRVTVGKELNVKLEFVVPSPGKHDLKLFLMSDSYVGVDQDPSFSVNVAEG
Pre-mRNA splicing helicase-like protein E 1772 Chaetomium Thermophilum GAEFMDIDKDAFAAKEQALKQERPEGLVGGLQPKKLVNLENLVFDQGNHLMTNPRVRMPEGTTKRVFKGYEEIHVPPPKKRSDPTDQNIPVTELPEWARIPFNTTKTLNKIQSKCFPTAFLDDGNMLVCAPTGSGKTNVAMLTMLREIGKNRNEKGEIDLDAFKIVYIAPLKALVQEQVGNFGKRLEPYGIKVSELTGDRQLTKQQISETQVIVTTPEKWDVITRKATDISYTNLVRLIIIDEIHLLHDDRGPVLESIVSRTIRRTEQTGEPVRIIGLSATLPNYRDVASFLRVDFEKGLFYFDGSYRPCPLRQEFIGVTDKKAIKQLKTMNDITYQKVLEHVGQNRNQMLIFVHSRKETAKTAKYIRDKALEMDTINQILKHDAGTREVLQEAASSVNNTDLKDLLPYGFGIHHAGMSRADRTDVEDLFASGHIQVLVCTATLAWGVNLPAHTVIIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQYDTYGEGIIITTQGEIPYYLSLLNQQLPIESQLVSKLVDSLNAEIVLGNVRNRDEGVEWLGYTYLFVRMLRSPGLYSVGAEYEDDVALEQKRVDLIHSAAMVLKKSNLIKYDEKTGKMQATELGRIASHYYISHESMDTYNKLIHPAMNDVELFRVFAQSGEFKYIPVRQEEKLELAKLLARVPIPVKESIEEPTAKINVLLQAYISRLKLEGLALMADMVYVTQSAGRILRAIFEICLKKGWASVAKLALNMCKMAEKRMWPTMSPLRQYPTCPAEIIKKAERMDVPWSSYFDLDPPRMGELLGMPKAGKTVCALVSKFPRVEIQGNVQPMTRSMLRIELTITPNFQWDVELHGVTESFWILVEDCDGEEILFHDVFILRKDLAEAEENEHTVEFTVPISEPMPPNYFISVISDRWMHSETRMPVSFQKLILPERFPPHTELLDLQPLPVSALKAKDYAALYPNWQQFNKIQTQTFNSLYNTDNNVLVAAPTGSGKTVCAEFALLRHWAKKDAGRAVYIAPFQELVDLRFQDWQKRLSHLRGGKEIVKLTGETTTDLKLLEQGDLILATPLQWDVLSRQWKRRKNVQTVELFIADDLHMLGGQMGYIYEIVVSRMHFIRTQTELPMRIVGLSVSLANARDIGEWIDAKKHDIYNFSPHVRPVPLELHIQSYTIPHFPSLMLAMAKPTYLAITQLSPDQPAIVFVPSRKQTRATARDLLTACLADDDEDRFLHVEVDQIRKLLDHVQEEALAEALSHGVGYYHEALSQSDKRIVKHLYNNGAIQVLIASRDVCWELDFTAHLVVVMGTQFFEGKEHRYIDYPLSEVLQMFGKALQPSKDGRSRGVLMLPAVKREYYKKFLNEALPVESHLHNFLPDAFVTEISTKMIESGEDAINWATFTYFYRRLLANPSYYGLQDPTHDGLSQYLSDLVETTLKQLSDARIIEMDEDEGTVAPLNAAMIAAYYNISYMTMEMFLLSLSHKSKLRTILEIVTAATEFESIQTRRHEEGILKRIYDHVPVKMNNPVWDSAHFKAFVLVQAHFSRMNLPIDLAKDQEVILQKILSLLSAIVDILSSEGHLNALNAMEMSQMVVQAMWDRDSPLKQIPNFTPEVVKVANKYGINDIFDFMEQMNPEENPNYASLVKDLGLTQAQLAQAANFTNNKYPDITLEFEVDDPDNIRAGEPAYLKIHIERELEEDEEFDPTVHAPFYPGKKSENWWLVVGEESTKTLLAIKRVTVGKELNVKLEFVVPSPGKHDLKLFLMSDSYVGVDQDPSFSVNVAEG
Pre-mRNA splicing helicase-like protein G 1772 Chaetomium Thermophilum GAEFMDIDKDAFAAKEQALKQERPEGLVGGLQPKKLVNLENLVFDQGNHLMTNPRVRMPEGTTKRVFKGYEEIHVPPPKKRSDPTDQNIPVTELPEWARIPFNTTKTLNKIQSKCFPTAFLDDGNMLVCAPTGSGKTNVAMLTMLREIGKNRNEKGEIDLDAFKIVYIAPLKALVQEQVGNFGKRLEPYGIKVSELTGDRQLTKQQISETQVIVTTPEKWDVITRKATDISYTNLVRLIIIDEIHLLHDDRGPVLESIVSRTIRRTEQTGEPVRIIGLSATLPNYRDVASFLRVDFEKGLFYFDGSYRPCPLRQEFIGVTDKKAIKQLKTMNDITYQKVLEHVGQNRNQMLIFVHSRKETAKTAKYIRDKALEMDTINQILKHDAGTREVLQEAASSVNNTDLKDLLPYGFGIHHAGMSRADRTDVEDLFASGHIQVLVCTATLAWGVNLPAHTVIIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQYDTYGEGIIITTQGEIPYYLSLLNQQLPIESQLVSKLVDSLNAEIVLGNVRNRDEGVEWLGYTYLFVRMLRSPGLYSVGAEYEDDVALEQKRVDLIHSAAMVLKKSNLIKYDEKTGKMQATELGRIASHYYISHESMDTYNKLIHPAMNDVELFRVFAQSGEFKYIPVRQEEKLELAKLLARVPIPVKESIEEPTAKINVLLQAYISRLKLEGLALMADMVYVTQSAGRILRAIFEICLKKGWASVAKLALNMCKMAEKRMWPTMSPLRQYPTCPAEIIKKAERMDVPWSSYFDLDPPRMGELLGMPKAGKTVCALVSKFPRVEIQGNVQPMTRSMLRIELTITPNFQWDVELHGVTESFWILVEDCDGEEILFHDVFILRKDLAEAEENEHTVEFTVPISEPMPPNYFISVISDRWMHSETRMPVSFQKLILPERFPPHTELLDLQPLPVSALKAKDYAALYPNWQQFNKIQTQTFNSLYNTDNNVLVAAPTGSGKTVCAEFALLRHWAKKDAGRAVYIAPFQELVDLRFQDWQKRLSHLRGGKEIVKLTGETTTDLKLLEQGDLILATPLQWDVLSRQWKRRKNVQTVELFIADDLHMLGGQMGYIYEIVVSRMHFIRTQTELPMRIVGLSVSLANARDIGEWIDAKKHDIYNFSPHVRPVPLELHIQSYTIPHFPSLMLAMAKPTYLAITQLSPDQPAIVFVPSRKQTRATARDLLTACLADDDEDRFLHVEVDQIRKLLDHVQEEALAEALSHGVGYYHEALSQSDKRIVKHLYNNGAIQVLIASRDVCWELDFTAHLVVVMGTQFFEGKEHRYIDYPLSEVLQMFGKALQPSKDGRSRGVLMLPAVKREYYKKFLNEALPVESHLHNFLPDAFVTEISTKMIESGEDAINWATFTYFYRRLLANPSYYGLQDPTHDGLSQYLSDLVETTLKQLSDARIIEMDEDEGTVAPLNAAMIAAYYNISYMTMEMFLLSLSHKSKLRTILEIVTAATEFESIQTRRHEEGILKRIYDHVPVKMNNPVWDSAHFKAFVLVQAHFSRMNLPIDLAKDQEVILQKILSLLSAIVDILSSEGHLNALNAMEMSQMVVQAMWDRDSPLKQIPNFTPEVVKVANKYGINDIFDFMEQMNPEENPNYASLVKDLGLTQAQLAQAANFTNNKYPDITLEFEVDDPDNIRAGEPAYLKIHIERELEEDEEFDPTVHAPFYPGKKSENWWLVVGEESTKTLLAIKRVTVGKELNVKLEFVVPSPGKHDLKLFLMSDSYVGVDQDPSFSVNVAEG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-10-20
Deposition Author(s): Absmeier, E. , Becke, C. , Santos, K.F. , Wahl, M.C. , Wollenhaupt, J.