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FASTA Sequence PDB Format mmCIF Format
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5M1S

Cryo-em structure of the e. coli replicative dna polymerase-clamp-exonuclase-theta complex bound to dna in the editing mode

PDB DOI: 10.2210/pdb5m1s/pdb

Classification: DNA BINDING PROTEIN
Organism(s): Escherichia Coli K12 , Synthetic Construct

Deposited: 2016-10-10
Deposition Author(s): Conrad, J. , Fernandez-Leiro, R. , Lamers, M.H. , Scheres, S.H.W.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 6.7 Å

5m1s
Literature

Cryo-em structure of the e. coli replicative dna polymerase-clamp-exonuclase-theta complex bound to dna in the editing mode

Conrad, J. , Fernandez-Leiro, R. , Lamers, M.H. , Scheres, S.H.W.

Primary Citation of Related Structures: 5M1S


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase III subunit alpha A 927 Escherichia Coli K12 , Synthetic Construct MSEPRFVHLRVHSDYSMIDGLAKTAPLVKKAAALGMPALAITDFTNLCGLVKFYGAGHGAGIKPIVGADFNVQCDLLGDELTHLTVLAANNTGYQNLTLLISKAYQRGYGAAGPIIDRDWLIELNEGLILLSGGRMGDVGRSLLRGNSALVDECVAFYEEHFPDRYFLELIRTGRPDEESYLHAAVELAEARGLPVVATNDVRFIDSSDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYMRSEEEMCELFADIPEALANTVEIAKRCNVTVRLGEYFLPQFPTGDMSTEDYLVKRAKEGLEERLAFLFPDEEERLKRRPEYDERLETELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGPGRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVADMYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPDPGMTLAKAFEAEPQLPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEEGKHPVTQFDKSDVEYAGLVKFDFLGLRTLTIINWALEMINKRRAKNGEPPLDIAAIPLDDKKSFDMLQRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREEISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEMAKQRSVFAEGAEKNGINAELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAEFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKGVGEGPIEAIIEARNKGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMNSLGDALKAADQHAKAEAIGQLDLFGVL
DNA polymerase III subunit beta B 366 Escherichia Coli K12 , Synthetic Construct MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVALVQPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGERMLVRSGRSRFSLSTLPAADFPNLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGEELRTVATDGHRLAVCSMPIGQSLPSHSVIVPRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTSKLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITANNPEQEEAEEILDVTYSGAEMEIGFNVSYVLDVLNALKCENVRMMLTDSVSSVQIEDAASQSAAYVVMPMRL
DNA polymerase III subunit beta C 366 Escherichia Coli K12 , Synthetic Construct MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVALVQPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGERMLVRSGRSRFSLSTLPAADFPNLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGEELRTVATDGHRLAVCSMPIGQSLPSHSVIVPRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTSKLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITANNPEQEEAEEILDVTYSGAEMEIGFNVSYVLDVLNALKCENVRMMLTDSVSSVQIEDAASQSAAYVVMPMRL
DNA polymerase III subunit epsilon D 243 Escherichia Coli K12 , Synthetic Construct MSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLTGNNFHVYLKPDRLVDPEAFGVHGIADEFLLDKPTFAEVADEFMDYIRGAELVIHNAAFDIGFMDYEFSLLKRDIPKTNTFCKVTDSLAVARKMFPGKRNSLDALCARYEIDNSKRTLHGALLDAQILAEVYLAMTGGQLSLPLAMEGETQQQQGEATIQRIVRQASKLRVVFATDEEIAAHEARLDLVQKKGGSCLWRA
DNA polymerase III subunit theta F 56 Escherichia Coli K12 , Synthetic Construct QTEMDKVNVDLAAAGVAFKERYNMPVIAEAVEREQPEHLRSWFRERLIAHRLASVN

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA Primer Strand p 17 NA TAGTACTAGGACGAAGT
DNA Template Strand t 22 NA GGAGTCCTTCGTCCTAGTACTA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2016-10-10
Deposition Author(s): Conrad, J. , Fernandez-Leiro, R. , Lamers, M.H. , Scheres, S.H.W.