5LVP
Human pdk1 kinase domain in complex with an hm-peptide bound to the pif-pocket
PDB DOI: 10.2210/pdb5lvp/pdb
Classification: TRANSFERASE Organism(s): Homo Sapiens , Synthetic Construct
Deposited: 2016-09-14 Deposition Author(s): Alzari, P.M. , Biondi, R.M. , Busschots, K. , Gervasio, F.L. , Herbrand, A.K. , Hindie, V. , Lisa, M.N. , Neimanis, S. , Odadzic, D. , Saladino, G. , Schulze, J.O. , Suess, E. , Zeuzem, S.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.5 Å
Human pdk1 kinase domain in complex with an hm-peptide bound to the pif-pocket
Alzari, P.M. , Biondi, R.M. , Busschots, K. , Gervasio, F.L. , Herbrand, A.K. , Hindie, V. , Lisa, M.N. , Neimanis, S. , Odadzic, D. , Saladino, G. , Schulze, J.O. , Suess, E. , Zeuzem, S.
Primary Citation of Related Structures: 5LVP
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 3-phosphoinositide-dependent protein kinase 1 | A | 311 | Homo Sapiens , Synthetic Construct | GAMDGTAAEPRPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKLT |
| 3-phosphoinositide-dependent protein kinase 1 | B | 311 | Homo Sapiens , Synthetic Construct | GAMDGTAAEPRPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKLT |
| 3-phosphoinositide-dependent protein kinase 1 | C | 311 | Homo Sapiens , Synthetic Construct | GAMDGTAAEPRPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKLT |
| 3-phosphoinositide-dependent protein kinase 1 | D | 311 | Homo Sapiens , Synthetic Construct | GAMDGTAAEPRPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKLT |
| hydrophobic-motif peptide of PKB/Akt | E | 15 | Homo Sapiens , Synthetic Construct | KGAGGGGFPQFSYSA |
| hydrophobic-motif peptide of PKB/Akt | F | 15 | Homo Sapiens , Synthetic Construct | KGAGGGGFPQFSYSA |
| hydrophobic-motif peptide of PKB/Akt | G | 15 | Homo Sapiens , Synthetic Construct | KGAGGGGFPQFSYSA |
| hydrophobic-motif peptide of PKB/Akt | H | 15 | Homo Sapiens , Synthetic Construct | KGAGGGGFPQFSYSA |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2016-09-14 Deposition Author(s): Alzari, P.M. , Biondi, R.M. , Busschots, K. , Gervasio, F.L. , Herbrand, A.K. , Hindie, V. , Lisa, M.N. , Neimanis, S. , Odadzic, D. , Saladino, G. , Schulze, J.O. , Suess, E. , Zeuzem, S.