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5LUX
Homeobox transcription factor cdx1 bound to methylated dna
PDB DOI: 10.2210/pdb5lux/pdb
Classification: TRANSCRIPTION Organism(s): Homo Sapiens , Synthetic Construct
Deposited: 2016-09-12 Deposition Author(s): Morgunova, E. , Popov, A. , Taipale, J.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3.23 Å
Homeobox transcription factor cdx1 bound to methylated dna
Morgunova, E. , Popov, A. , Taipale, J.
Primary Citation of Related Structures: 5LUX
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(P*TP*TP*GP*TP*GP*TP*TP*TP*TP*AP*(5CM)P*GP*AP*CP*CP*TP*C)-3') | a | 17 | NA | TTGTGTTTTACGACCTC |
| DNA (5'-D(P*TP*TP*GP*TP*GP*TP*TP*TP*TP*AP*(5CM)P*GP*AP*CP*CP*TP*CP*C)-3') | b | 18 | NA | TTGTGTTTTACGACCTCC |
| DNA (5'-D(P*GP*AP*GP*GP*TP*(5CM)P*GP*TP*AP*AP*AP*AP*CP*AP*CP*AP*A)-3') | f | 17 | NA | GAGGTCGTAAAACACAA |
| DNA (5'-D(P*GP*GP*AP*GP*GP*TP*(5CM)P*GP*TP*AP*AP*AP*AP*CP*AP*CP*AP*A)-3') | e | 18 | NA | GGAGGTCGTAAAACACAA |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Homeobox protein CDX-1 | K | 63 | Homo Sapiens , Synthetic Construct | TKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVNKK |
| Homeobox protein CDX-1 | L | 63 | Homo Sapiens , Synthetic Construct | TKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVNKK |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2016-09-12 Deposition Author(s): Morgunova, E. , Popov, A. , Taipale, J.