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5LKG

Protruding domain of gii.17 norovirus kawasaki308 in complex with 2-fucosyllactose (2'fl)

PDB DOI: 10.2210/pdb5lkg/pdb

Classification: VIRAL PROTEIN
Organism(s): Norovirus Hu/Gii/Jp/2015/Gii.P17_Gii.17/Kawasaki308

Deposited: 2016-07-22
Deposition Author(s): Hansman, G.S. , Morozov, V. , Singh, B.K.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.51 Å

Literature

Protruding domain of gii.17 norovirus kawasaki308 in complex with 2-fucosyllactose (2'fl)

Hansman, G.S. , Morozov, V. , Singh, B.K.

Primary Citation of Related Structures: 5LKG


Proteins
Molecule Chains Sequence Length Organism Sequence
Capsid protein VP1 A 308 Norovirus Hu/Gii/Jp/2015/Gii.P17_Gii.17/Kawasaki308 GSKPFSLPILTLSELTNSRFPVPIDSLFTAQNNVLQVQCQNGRCTLDGELQGTTQLLPTGICAFRGRVTAQINQRDRWHMQLQNLNGTTYDPTDDVPAPLGTPDFKGVVFGMVSQRNVGNDAPGSTRAQQAWVSTYSPQFVPKLGSVNLRISDNDDFQFQPTKFTPVGVNDDDDGHPFRQWELPNYSGELTLNMNLAPPVAPNFPGEQLLFFRSFVPCSGGYNQGIIDCLIPQEWIQHFYQESAPSQSDVALIRYVNPDTGRTLFEAKLHRSGYITVAHSGDYPLVVPANGHFRFDSWVNQFYSLAPM
Capsid protein VP1 B 308 Norovirus Hu/Gii/Jp/2015/Gii.P17_Gii.17/Kawasaki308 GSKPFSLPILTLSELTNSRFPVPIDSLFTAQNNVLQVQCQNGRCTLDGELQGTTQLLPTGICAFRGRVTAQINQRDRWHMQLQNLNGTTYDPTDDVPAPLGTPDFKGVVFGMVSQRNVGNDAPGSTRAQQAWVSTYSPQFVPKLGSVNLRISDNDDFQFQPTKFTPVGVNDDDDGHPFRQWELPNYSGELTLNMNLAPPVAPNFPGEQLLFFRSFVPCSGGYNQGIIDCLIPQEWIQHFYQESAPSQSDVALIRYVNPDTGRTLFEAKLHRSGYITVAHSGDYPLVVPANGHFRFDSWVNQFYSLAPM
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-07-22
Deposition Author(s): Hansman, G.S. , Morozov, V. , Singh, B.K.