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5LAK

Ligand-bound structure of cavally virus 3cl protease

PDB DOI: 10.2210/pdb5lak/pdb

Classification: HYDROLASE
Organism(s): Encephalitozoon Cuniculi (Strain Gb-M1) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2016-06-14
Deposition Author(s): Diederich, W.E. , Heine, A. , Kanitz, M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.299 Å

Literature

Ligand-bound structure of cavally virus 3cl protease

Diederich, W.E. , Heine, A. , Kanitz, M.

Primary Citation of Related Structures: 5LAK


Proteins
Molecule Chains Sequence Length Organism Sequence
3Cl Protease A 314 Encephalitozoon Cuniculi (Strain Gb-M1) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) SAASNPSISHIVLEMPVAINPLIKYTTRTSVSSLRGAVVNGYIYIQRHLFGSKKQEFEACYNNGKGLLNCKNLERSKYDIDSAELIGTLIRIPLHDKHSIPHISIHPDPLSYNGPVTLYLSRYDTELNKDVLCVHTGFMSEGHHDIKTVFGDCGGMLFDPKGRLLGLHCAGSDDVVFMDTTTGKSNIWTSYKLQHPSEIMITLNNEINLPNPANYDFETTKVVYQHPLRNVCATLETLQHLTNKTNAKLPYDSRLLSDFNITAEQYNQYGYYIDYNNFVNNFNRYTTTTIGTKSFETCIKYGLMDNKKPDYYNQ
3Cl Protease B 314 Encephalitozoon Cuniculi (Strain Gb-M1) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) SAASNPSISHIVLEMPVAINPLIKYTTRTSVSSLRGAVVNGYIYIQRHLFGSKKQEFEACYNNGKGLLNCKNLERSKYDIDSAELIGTLIRIPLHDKHSIPHISIHPDPLSYNGPVTLYLSRYDTELNKDVLCVHTGFMSEGHHDIKTVFGDCGGMLFDPKGRLLGLHCAGSDDVVFMDTTTGKSNIWTSYKLQHPSEIMITLNNEINLPNPANYDFETTKVVYQHPLRNVCATLETLQHLTNKTNAKLPYDSRLLSDFNITAEQYNQYGYYIDYNNFVNNFNRYTTTTIGTKSFETCIKYGLMDNKKPDYYNQ
3Cl Protease C 314 Encephalitozoon Cuniculi (Strain Gb-M1) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) SAASNPSISHIVLEMPVAINPLIKYTTRTSVSSLRGAVVNGYIYIQRHLFGSKKQEFEACYNNGKGLLNCKNLERSKYDIDSAELIGTLIRIPLHDKHSIPHISIHPDPLSYNGPVTLYLSRYDTELNKDVLCVHTGFMSEGHHDIKTVFGDCGGMLFDPKGRLLGLHCAGSDDVVFMDTTTGKSNIWTSYKLQHPSEIMITLNNEINLPNPANYDFETTKVVYQHPLRNVCATLETLQHLTNKTNAKLPYDSRLLSDFNITAEQYNQYGYYIDYNNFVNNFNRYTTTTIGTKSFETCIKYGLMDNKKPDYYNQ
3Cl Protease D 314 Encephalitozoon Cuniculi (Strain Gb-M1) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) SAASNPSISHIVLEMPVAINPLIKYTTRTSVSSLRGAVVNGYIYIQRHLFGSKKQEFEACYNNGKGLLNCKNLERSKYDIDSAELIGTLIRIPLHDKHSIPHISIHPDPLSYNGPVTLYLSRYDTELNKDVLCVHTGFMSEGHHDIKTVFGDCGGMLFDPKGRLLGLHCAGSDDVVFMDTTTGKSNIWTSYKLQHPSEIMITLNNEINLPNPANYDFETTKVVYQHPLRNVCATLETLQHLTNKTNAKLPYDSRLLSDFNITAEQYNQYGYYIDYNNFVNNFNRYTTTTIGTKSFETCIKYGLMDNKKPDYYNQ
BEZ-TYR-TYR-ASN-ECC Peptide inhibitor I 5 Encephalitozoon Cuniculi (Strain Gb-M1) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) XYYNQ
BEZ-TYR-TYR-ASN-ECC Peptide inhibitor J 5 Encephalitozoon Cuniculi (Strain Gb-M1) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) XYYNQ
BEZ-TYR-TYR-ASN-ECC Peptide inhibitor K 5 Encephalitozoon Cuniculi (Strain Gb-M1) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) XYYNQ
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-06-14
Deposition Author(s): Diederich, W.E. , Heine, A. , Kanitz, M.