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5KN9

Muty n-terminal domain in complex with dna containing an intrahelical oxog:a base-pair

PDB DOI: 10.2210/pdb5kn9/pdb

Classification: Hydrolase/DNA
Organism(s): Ki Polyomavirus , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2016-06-27
Deposition Author(s): Chakravarthy, S. , Verdine, G.L. , Wang, L.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.93 Å

5kn9
Literature

Muty n-terminal domain in complex with dna containing an intrahelical oxog:a base-pair

Chakravarthy, S. , Verdine, G.L. , Wang, L.

Primary Citation of Related Structures: 5KN9


Proteins
Molecule Chains Sequence Length Organism Sequence
Adenine DNA glycosylase A 232 Ki Polyomavirus , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) GSHMTRETERFPAREFQRDLLDWFARERRDLPWRKDRDPYKVWVSEVMLQQTRYETVIPYFEQFIDRFPTLEALADADEDEVLKAWEGLGYYSRVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTVGAVLSLAYGVPEPAVNGNVMRVLSRLFLVTDDIAKCSTRKRFEQIVREIMAYENPGAFNEALIELGALVCTPRRPSCLLCPVQAYCQAFAEGVAEELPVKM

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*AP*TP*CP*CP*(8OG)P*GP*TP*GP*CP*T)-3') c 10 NA ATCCGGTGCT
DNA (5'-D(*AP*GP*CP*AP*CP*AP*GP*GP*AP*T)-3') d 10 NA AGCACAGGAT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-06-27
Deposition Author(s): Chakravarthy, S. , Verdine, G.L. , Wang, L.