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FASTA Sequence PDB Format mmCIF Format
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5KK5

Ascpf1(e993a)-crrna-dna ternary complex

PDB DOI: 10.2210/pdb5kk5/pdb

Classification: Hydrolase/DNA/RNA
Organism(s): Acidaminococcus Sp. (Strain Bv3L6) , Synthetic Construct

Deposited: 2016-06-21
Deposition Author(s): Gao, P. , Huang, Z. , Patel, D.J. , Rajashankar, K.R. , Yang, H.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.289 Å

5kk5
Literature

Ascpf1(e993a)-crrna-dna ternary complex

Gao, P. , Huang, Z. , Patel, D.J. , Rajashankar, K.R. , Yang, H.

Primary Citation of Related Structures: 5KK5


Proteins
Molecule Chains Sequence Length Organism Sequence
CRISPR-associated endonuclease Cpf1 A 1308 Acidaminococcus Sp. (Strain Bv3L6) , Synthetic Construct SMTQFEGFTNLYQVSKTLRFELIPQGKTLKHIQEQGFIEEDKARNDHYKELKPIIDRIYKTYADQCLQLVQLDWENLSAAIDSYRKEKTEETRNALIEEQATYRNAIHDYFIGRTDNLTDAINKRHAEIYKGLFKAELFNGKVLKQLGTVTTTEHENALLRSFDKFTTYFSGFYENRKNVFSAEDISTAIPHRIVQDNFPKFKENCHIFTRLITAVPSLREHFENVKKAIGIFVSTSIEEVFSFPFYNQLLTQTQIDLYNQLLGGISREAGTEKIKGLNEVLNLAIQKNDETAHIIASLPHRFIPLFKQILSDRNTLSFILEEFKSDEEVIQSFCKYKTLLRNENVLETAEALFNELNSIDLTHIFISHKKLETISSALCDHWDTLRNALYERRISELTGKITKSAKEKVQRSLKHEDINLQEIISAAGKELSEAFKQKTSEILSHAHAALDQPLPTTLKKQEEKEILKSQLDSLLGLYHLLDWFAVDESNEVDPEFSARLTGIKLEMEPSLSFYNKARNYATKKPYSVEKFKLNFQMPTLASGWDVNKEKNNGAILFVKNGLYYLGIMPKQKGRYKALSFEPTEKTSEGFDKMYYDYFPDAAKMIPKCSTQLKAVTAHFQTHTTPILLSNNFIEPLEITKEIYDLNNPEKEPKKFQTAYAKKTGDQKGYREALCKWIDFTRDFLSKYTKTTSIDLSSLRPSSQYKDLGEYYAELNPLLYHISFQRIAEKEIMDAVETGKLYLFQIYNKDFAKGHHGKPNLHTLYWTGLFSPENLAKTSIKLNGQAELFYRPKSRMKRMAHRLGEKMLNKKLKDQKTPIPDTLYQELYDYVNHRLSHDLSDEARALLPNVITKEVSHEIIKDRRFTSDKFFFHVPITLNYQAANSPSKFNQRVNAYLKEHPETPIIGIDRGERNLIYITVIDSTGKILEQRSLNTIQQFDYQKKLDNREKERVAARQAWSVVGTIKDLKQGYLSQVIHEIVDLMIHYQAVVVLANLNFGFKSKRTGIAEKAVYQQFEKMLIDKLNCLVLKDYPAEKVGGVLNPYQLTDQFTSFAKMGTQSGFLFYVPAPYTSKIDPLTGFVDPFVWKTIKNHESRKHFLEGFDFLHYDVKTGDFILHFKMNRNLSFQRGLPGFMPAWDIVFEKNETQFDAKGTPFIAGKRIVPVIENHRFTGRYRDLYPANELIALLEEKGIVFRDGSNILPKLLENDDSHAIDTMVALIRSVLQMRNSNAATGEDYINSPVRDLNGVCFDSRFQNPEWPMDADANGAYHIALKGQLLLNHLKESKDLKLQNGISNQDWLAYIQELRN

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (40-MER) b 45 NA UAAUUUCUACUCUUGUAGAUGAGAAGUCAUUUAAUAAGGCCACUC
DNA (28-MER) c 33 NA GAGTGGCCTTATTAAATGACTTCTCGAAACATG
DNA (8-mer) d 8 NA CATGTTTC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-06-21
Deposition Author(s): Gao, P. , Huang, Z. , Patel, D.J. , Rajashankar, K.R. , Yang, H.