5KDS
Zmpb metallopeptidase in complex with an o-glycopeptide (a2,6-sialylated core-3 pentapeptide).
PDB DOI: 10.2210/pdb5kds/pdb
Classification: HYDROLASE Organism(s): Bos Taurus , Clostridium Perfringens (Strain Atcc 13124 / Dsm 756 / Jcm 1290 / Ncimb 6125 / Nctc 8237 / Type A)
Deposited: 2016-06-08 Deposition Author(s): Boraston, A.B. , Ficko-Blean, E. , Noach, I. , Stuart, C.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 1.6 Å
Zmpb metallopeptidase in complex with an o-glycopeptide (a2,6-sialylated core-3 pentapeptide).
Boraston, A.B. , Ficko-Blean, E. , Noach, I. , Stuart, C.
Primary Citation of Related Structures: 5KDS
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| alpha2,6-sialylated core-3 pentapeptide | G | 5 | Bos Taurus , Clostridium Perfringens (Strain Atcc 13124 / Dsm 756 / Jcm 1290 / Ncimb 6125 / Nctc 8237 / Type A) | TAPGG |
| F5/8 type C domain protein | A | 530 | Bos Taurus , Clostridium Perfringens (Strain Atcc 13124 / Dsm 756 / Jcm 1290 / Ncimb 6125 / Nctc 8237 / Type A) | MGSSHHHHHHSSGLVPRGSHMASVLELEMRGDSISEAKKRKVWNFQDWQITGLSARAGDKITVYVDVAEGDPTPTLLYKQSLTQHGGATSFQLKPGKNEITIPEINYESNGIPKDVIQGGDLFFTNYKSDSQKRAPKVRIEGASKYPVFILGKSDENEVMKELEAYVEKIKAEPKTTPNIFAVSSNKSLEFVQATYALDWYKKNNKTPKYTAEQWDQYIADAMGFWGFDNSKDVNSDFNFRIMPMVKNLSGGAFMNAGNGVIGIRPGNQDAILAANKGWGVAHELGHNFDTGGRTIVEVTNNMMPLFFESKYKTKTRITDQNIWENNTYPKVGLDDYSNNELYNKADSTHLAQLAPLWQLYLYDNTFYGKFERQFRERDFGNKNREDIYKSWVVAASDAMELDLTEFFARHGIRVDDKVKEDLAKYPKPDKKIYYLNDLAMNYKGDGFTENAKVSVSTSGSNGNIKLSFSVDDENKDNILGYEIRRDGKYVGFTSNDSFVDTKSNLDEDGVYVVTPYDRKLNTLNPIEVN |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2016-06-08 Deposition Author(s): Boraston, A.B. , Ficko-Blean, E. , Noach, I. , Stuart, C.