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5KD4

Crystal structure of murine mhc-i h-2dd in complex with murine beta2-microglobulin and a variant of peptide (pvi10) of hiv gp120 mn isolate (igpgrafyvi)

PDB DOI: 10.2210/pdb5kd4/pdb

Classification: IMMUNE SYSTEM
Organism(s): Human Immunodeficiency Virus 1 , Mus Musculus

Deposited: 2016-06-07
Deposition Author(s): Jiang, J. , Margulies, D. , Natarajan, K.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.05 Å

5kd4
Literature

Crystal structure of murine mhc-i h-2dd in complex with murine beta2-microglobulin and a variant of peptide (pvi10) of hiv gp120 mn isolate (igpgrafyvi)

Jiang, J. , Margulies, D. , Natarajan, K.

Primary Citation of Related Structures: 5KD4


Proteins
Molecule Chains Sequence Length Organism Sequence
H-2 class I histocompatibility antigen, D-D alpha chain A 277 Human Immunodeficiency Virus 1 , Mus Musculus MSHSLRYFVTAVSRPGFGEPRYMEVGYVDNTEFVRFDSDAENPRYEPRARWIEQEGPEYWERETRRAKGNEQSFRVDLRTALRYYNQSAGGSHTLQWMAGCDVESDGRLLRGYWQFAYDGCDYIALNEDLKTWTAADMAAQITRRKWEQAGAAERDRAYLEGECVEWLRRYLKNGNATLLRTDPPKAHVTHHRRPEGDVTLRCWALGFYPADITLTWQLNGEELTQEMELVETRPAGDGTFQKWASVVVPLGKEQKYTCHVEHEGLPEPLTLRWGKE
H-2 class I histocompatibility antigen, D-D alpha chain C 277 Human Immunodeficiency Virus 1 , Mus Musculus MSHSLRYFVTAVSRPGFGEPRYMEVGYVDNTEFVRFDSDAENPRYEPRARWIEQEGPEYWERETRRAKGNEQSFRVDLRTALRYYNQSAGGSHTLQWMAGCDVESDGRLLRGYWQFAYDGCDYIALNEDLKTWTAADMAAQITRRKWEQAGAAERDRAYLEGECVEWLRRYLKNGNATLLRTDPPKAHVTHHRRPEGDVTLRCWALGFYPADITLTWQLNGEELTQEMELVETRPAGDGTFQKWASVVVPLGKEQKYTCHVEHEGLPEPLTLRWGKE
Beta-2-microglobulin B 100 Human Immunodeficiency Virus 1 , Mus Musculus MIQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYACRVKHASMAEPKTVYWDRDM
Beta-2-microglobulin D 100 Human Immunodeficiency Virus 1 , Mus Musculus MIQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYACRVKHASMAEPKTVYWDRDM
Peptide of HIV gp120 MN isolate, PVI10 (IGPGRAFYVI) P 10 Human Immunodeficiency Virus 1 , Mus Musculus IGPGRAFYVI
Peptide of HIV gp120 MN isolate, PVI10 (IGPGRAFYVI) Q 10 Human Immunodeficiency Virus 1 , Mus Musculus IGPGRAFYVI
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-06-07
Deposition Author(s): Jiang, J. , Margulies, D. , Natarajan, K.