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FASTA Sequence PDB Format mmCIF Format
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5K9Q

Crystal structure of multidonor hv1-18-class broadly neutralizing influenza a antibody 16.a.26 in complex with a/hong kong/1-4-ma21-1/1968 (h3n2) hemagglutinin

PDB DOI: 10.2210/pdb5k9q/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo Sapiens , Influenza A Virus , Influenza A Virus (Strain A/Hong Kong/1/1968 H3N2)

Deposited: 2016-06-01
Deposition Author(s): Joyce, M.G. , Kwong, P.D. , Mascola, J.R. , Mcdermott, A.B. , Thomas, P.V. , Wheatley, A.K.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.503 Å

5k9q
Literature

Crystal structure of multidonor hv1-18-class broadly neutralizing influenza a antibody 16.a.26 in complex with a/hong kong/1-4-ma21-1/1968 (h3n2) hemagglutinin

Joyce, M.G. , Kwong, P.D. , Mascola, J.R. , Mcdermott, A.B. , Thomas, P.V. , Wheatley, A.K.

Primary Citation of Related Structures: 5K9Q


Proteins
Molecule Chains Sequence Length Organism Sequence
Hemagglutinin HA1 A 320 Homo Sapiens , Influenza A Virus , Influenza A Virus (Strain A/Hong Kong/1/1968 H3N2) NSTATLCLGHHAVPNGTLVKTITDDQIEVTNATELVQSSSTGKICNNPHRILDGIDCTLIDALLGDPHCDVFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEFITEGFTWTGVTQNGGSNACKRGPGSGFFSRLNWLTKSGSTYPVLNVTMPNNDNFDKLYIWGVHHPSTNQEQTSLYVQASGRVTVSTRRSQQTIIPNIESRPWVRGLSSRISIYWTIVKPGDVLVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIDTCISECITPNGSIPNDKPFQNVNKITYGACPKYVKQNTLKLATGMRNVPEKA
Hemagglutinin HA1 C 320 Homo Sapiens , Influenza A Virus , Influenza A Virus (Strain A/Hong Kong/1/1968 H3N2) NSTATLCLGHHAVPNGTLVKTITDDQIEVTNATELVQSSSTGKICNNPHRILDGIDCTLIDALLGDPHCDVFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEFITEGFTWTGVTQNGGSNACKRGPGSGFFSRLNWLTKSGSTYPVLNVTMPNNDNFDKLYIWGVHHPSTNQEQTSLYVQASGRVTVSTRRSQQTIIPNIESRPWVRGLSSRISIYWTIVKPGDVLVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIDTCISECITPNGSIPNDKPFQNVNKITYGACPKYVKQNTLKLATGMRNVPEKA
Hemagglutinin HA1 E 320 Homo Sapiens , Influenza A Virus , Influenza A Virus (Strain A/Hong Kong/1/1968 H3N2) NSTATLCLGHHAVPNGTLVKTITDDQIEVTNATELVQSSSTGKICNNPHRILDGIDCTLIDALLGDPHCDVFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEFITEGFTWTGVTQNGGSNACKRGPGSGFFSRLNWLTKSGSTYPVLNVTMPNNDNFDKLYIWGVHHPSTNQEQTSLYVQASGRVTVSTRRSQQTIIPNIESRPWVRGLSSRISIYWTIVKPGDVLVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIDTCISECITPNGSIPNDKPFQNVNKITYGACPKYVKQNTLKLATGMRNVPEKA
Hemagglutinin HA1 M 320 Homo Sapiens , Influenza A Virus , Influenza A Virus (Strain A/Hong Kong/1/1968 H3N2) NSTATLCLGHHAVPNGTLVKTITDDQIEVTNATELVQSSSTGKICNNPHRILDGIDCTLIDALLGDPHCDVFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEFITEGFTWTGVTQNGGSNACKRGPGSGFFSRLNWLTKSGSTYPVLNVTMPNNDNFDKLYIWGVHHPSTNQEQTSLYVQASGRVTVSTRRSQQTIIPNIESRPWVRGLSSRISIYWTIVKPGDVLVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIDTCISECITPNGSIPNDKPFQNVNKITYGACPKYVKQNTLKLATGMRNVPEKA
Hemagglutinin HA1 O 320 Homo Sapiens , Influenza A Virus , Influenza A Virus (Strain A/Hong Kong/1/1968 H3N2) NSTATLCLGHHAVPNGTLVKTITDDQIEVTNATELVQSSSTGKICNNPHRILDGIDCTLIDALLGDPHCDVFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEFITEGFTWTGVTQNGGSNACKRGPGSGFFSRLNWLTKSGSTYPVLNVTMPNNDNFDKLYIWGVHHPSTNQEQTSLYVQASGRVTVSTRRSQQTIIPNIESRPWVRGLSSRISIYWTIVKPGDVLVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIDTCISECITPNGSIPNDKPFQNVNKITYGACPKYVKQNTLKLATGMRNVPEKA
Hemagglutinin HA1 Q 320 Homo Sapiens , Influenza A Virus , Influenza A Virus (Strain A/Hong Kong/1/1968 H3N2) NSTATLCLGHHAVPNGTLVKTITDDQIEVTNATELVQSSSTGKICNNPHRILDGIDCTLIDALLGDPHCDVFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEFITEGFTWTGVTQNGGSNACKRGPGSGFFSRLNWLTKSGSTYPVLNVTMPNNDNFDKLYIWGVHHPSTNQEQTSLYVQASGRVTVSTRRSQQTIIPNIESRPWVRGLSSRISIYWTIVKPGDVLVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIDTCISECITPNGSIPNDKPFQNVNKITYGACPKYVKQNTLKLATGMRNVPEKA
Hemagglutinin HA2 B 170 Homo Sapiens , Influenza A Virus , Influenza A Virus (Strain A/Hong Kong/1/1968 H3N2) FGAIAGFIENGWEGMIDGWYGFRHQNSEGTGQAADLKSTQAAIDQINGKLNRVIEKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFEKTRRQLRENAEDMGNGCFKIYHKCDNACIESIRNGTYDHDVYRDEALNNRFQ
Hemagglutinin HA2 D 170 Homo Sapiens , Influenza A Virus , Influenza A Virus (Strain A/Hong Kong/1/1968 H3N2) FGAIAGFIENGWEGMIDGWYGFRHQNSEGTGQAADLKSTQAAIDQINGKLNRVIEKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFEKTRRQLRENAEDMGNGCFKIYHKCDNACIESIRNGTYDHDVYRDEALNNRFQ
Hemagglutinin HA2 F 170 Homo Sapiens , Influenza A Virus , Influenza A Virus (Strain A/Hong Kong/1/1968 H3N2) FGAIAGFIENGWEGMIDGWYGFRHQNSEGTGQAADLKSTQAAIDQINGKLNRVIEKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFEKTRRQLRENAEDMGNGCFKIYHKCDNACIESIRNGTYDHDVYRDEALNNRFQ
Hemagglutinin HA2 N 170 Homo Sapiens , Influenza A Virus , Influenza A Virus (Strain A/Hong Kong/1/1968 H3N2) FGAIAGFIENGWEGMIDGWYGFRHQNSEGTGQAADLKSTQAAIDQINGKLNRVIEKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFEKTRRQLRENAEDMGNGCFKIYHKCDNACIESIRNGTYDHDVYRDEALNNRFQ
Hemagglutinin HA2 P 170 Homo Sapiens , Influenza A Virus , Influenza A Virus (Strain A/Hong Kong/1/1968 H3N2) FGAIAGFIENGWEGMIDGWYGFRHQNSEGTGQAADLKSTQAAIDQINGKLNRVIEKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFEKTRRQLRENAEDMGNGCFKIYHKCDNACIESIRNGTYDHDVYRDEALNNRFQ
Hemagglutinin HA2 R 170 Homo Sapiens , Influenza A Virus , Influenza A Virus (Strain A/Hong Kong/1/1968 H3N2) FGAIAGFIENGWEGMIDGWYGFRHQNSEGTGQAADLKSTQAAIDQINGKLNRVIEKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFEKTRRQLRENAEDMGNGCFKIYHKCDNACIESIRNGTYDHDVYRDEALNNRFQ
16.a.26 Heavy chain G 231 Homo Sapiens , Influenza A Virus , Influenza A Virus (Strain A/Hong Kong/1/1968 H3N2) QVQLVQSGPEVKKPGASVKVSCKASGYSFSRYGISWVRQAPGQGLEWLGWISGYTGNTNYAQKFQGRVTMTTDTSTSTASMELRSLRSDDTAVYYCARDKKQGEVVLPAASFRWFAPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
16.a.26 Heavy chain H 231 Homo Sapiens , Influenza A Virus , Influenza A Virus (Strain A/Hong Kong/1/1968 H3N2) QVQLVQSGPEVKKPGASVKVSCKASGYSFSRYGISWVRQAPGQGLEWLGWISGYTGNTNYAQKFQGRVTMTTDTSTSTASMELRSLRSDDTAVYYCARDKKQGEVVLPAASFRWFAPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
16.a.26 Heavy chain J 231 Homo Sapiens , Influenza A Virus , Influenza A Virus (Strain A/Hong Kong/1/1968 H3N2) QVQLVQSGPEVKKPGASVKVSCKASGYSFSRYGISWVRQAPGQGLEWLGWISGYTGNTNYAQKFQGRVTMTTDTSTSTASMELRSLRSDDTAVYYCARDKKQGEVVLPAASFRWFAPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
16.a.26 Heavy chain S 231 Homo Sapiens , Influenza A Virus , Influenza A Virus (Strain A/Hong Kong/1/1968 H3N2) QVQLVQSGPEVKKPGASVKVSCKASGYSFSRYGISWVRQAPGQGLEWLGWISGYTGNTNYAQKFQGRVTMTTDTSTSTASMELRSLRSDDTAVYYCARDKKQGEVVLPAASFRWFAPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
16.a.26 Heavy chain U 231 Homo Sapiens , Influenza A Virus , Influenza A Virus (Strain A/Hong Kong/1/1968 H3N2) QVQLVQSGPEVKKPGASVKVSCKASGYSFSRYGISWVRQAPGQGLEWLGWISGYTGNTNYAQKFQGRVTMTTDTSTSTASMELRSLRSDDTAVYYCARDKKQGEVVLPAASFRWFAPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
16.a.26 Heavy chain X 231 Homo Sapiens , Influenza A Virus , Influenza A Virus (Strain A/Hong Kong/1/1968 H3N2) QVQLVQSGPEVKKPGASVKVSCKASGYSFSRYGISWVRQAPGQGLEWLGWISGYTGNTNYAQKFQGRVTMTTDTSTSTASMELRSLRSDDTAVYYCARDKKQGEVVLPAASFRWFAPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
16.a.26 Light chain I 214 Homo Sapiens , Influenza A Virus , Influenza A Virus (Strain A/Hong Kong/1/1968 H3N2) DIQMTQSPVSLSASVGDRVTITCRASQSIGKFLNWYQQKPGRAPKLLIYYASNLETGGPSRFSGRGSETEFSLTISSLQPEDFATYYCQQSNNVPHTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
16.a.26 Light chain K 214 Homo Sapiens , Influenza A Virus , Influenza A Virus (Strain A/Hong Kong/1/1968 H3N2) DIQMTQSPVSLSASVGDRVTITCRASQSIGKFLNWYQQKPGRAPKLLIYYASNLETGGPSRFSGRGSETEFSLTISSLQPEDFATYYCQQSNNVPHTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
16.a.26 Light chain L 214 Homo Sapiens , Influenza A Virus , Influenza A Virus (Strain A/Hong Kong/1/1968 H3N2) DIQMTQSPVSLSASVGDRVTITCRASQSIGKFLNWYQQKPGRAPKLLIYYASNLETGGPSRFSGRGSETEFSLTISSLQPEDFATYYCQQSNNVPHTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
16.a.26 Light chain T 214 Homo Sapiens , Influenza A Virus , Influenza A Virus (Strain A/Hong Kong/1/1968 H3N2) DIQMTQSPVSLSASVGDRVTITCRASQSIGKFLNWYQQKPGRAPKLLIYYASNLETGGPSRFSGRGSETEFSLTISSLQPEDFATYYCQQSNNVPHTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
16.a.26 Light chain V 214 Homo Sapiens , Influenza A Virus , Influenza A Virus (Strain A/Hong Kong/1/1968 H3N2) DIQMTQSPVSLSASVGDRVTITCRASQSIGKFLNWYQQKPGRAPKLLIYYASNLETGGPSRFSGRGSETEFSLTISSLQPEDFATYYCQQSNNVPHTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
16.a.26 Light chain Y 214 Homo Sapiens , Influenza A Virus , Influenza A Virus (Strain A/Hong Kong/1/1968 H3N2) DIQMTQSPVSLSASVGDRVTITCRASQSIGKFLNWYQQKPGRAPKLLIYYASNLETGGPSRFSGRGSETEFSLTISSLQPEDFATYYCQQSNNVPHTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-06-01
Deposition Author(s): Joyce, M.G. , Kwong, P.D. , Mascola, J.R. , Mcdermott, A.B. , Thomas, P.V. , Wheatley, A.K.