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FASTA Sequence PDB Format mmCIF Format
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5K9O

Crystal structure of multidonor hv1-18+hd3-9 class broadly neutralizing influenza a antibody 31.b.09 in complex with hemagglutinin h1 a/california/04/2009

PDB DOI: 10.2210/pdb5k9o/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo Sapiens , Influenza A Virus (Strain Swl A/California/04/2009 H1N1)

Deposited: 2016-06-01
Deposition Author(s): Joyce, M.G. , Kwong, P.D. , Mascola, J.R. , Mcdermott, A.B. , Thomas, P.V. , Wheatley, A.K.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.387 Å

5k9o
Literature

Crystal structure of multidonor hv1-18+hd3-9 class broadly neutralizing influenza a antibody 31.b.09 in complex with hemagglutinin h1 a/california/04/2009

Joyce, M.G. , Kwong, P.D. , Mascola, J.R. , Mcdermott, A.B. , Thomas, P.V. , Wheatley, A.K.

Primary Citation of Related Structures: 5K9O


Proteins
Molecule Chains Sequence Length Organism Sequence
31.b.09 Heavy Fv A 227 Homo Sapiens , Influenza A Virus (Strain Swl A/California/04/2009 H1N1) QVQLVQSGAEVKKPGASVKVSCKASGYSFSSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVFYCARDRPHILTGFDFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
31.b.09 Heavy Fv H 227 Homo Sapiens , Influenza A Virus (Strain Swl A/California/04/2009 H1N1) QVQLVQSGAEVKKPGASVKVSCKASGYSFSSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVFYCARDRPHILTGFDFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
31.b.09 Light Fv B 219 Homo Sapiens , Influenza A Virus (Strain Swl A/California/04/2009 H1N1) DVVMTQSPVSLPVTLGQPASISCRSSQGLVYIDGNTYLNWFQQRPGQSPRRLIYNVFTRDSGVPDRFSGSGSGTDFTLKITTVEAEDVGVYYCMQGTHWPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC
31.b.09 Light Fv L 219 Homo Sapiens , Influenza A Virus (Strain Swl A/California/04/2009 H1N1) DVVMTQSPVSLPVTLGQPASISCRSSQGLVYIDGNTYLNWFQQRPGQSPRRLIYNVFTRDSGVPDRFSGSGSGTDFTLKITTVEAEDVGVYYCMQGTHWPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC
Hemagglutinin F 505 Homo Sapiens , Influenza A Virus (Strain Swl A/California/04/2009 H1N1) DTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETPSSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPSTSADQQSLYQNADTYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPKGAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNIPSIQSRGLFGAIAGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVSG
Hemagglutinin I 505 Homo Sapiens , Influenza A Virus (Strain Swl A/California/04/2009 H1N1) DTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETPSSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPSTSADQQSLYQNADTYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPKGAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNIPSIQSRGLFGAIAGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVSG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-06-01
Deposition Author(s): Joyce, M.G. , Kwong, P.D. , Mascola, J.R. , Mcdermott, A.B. , Thomas, P.V. , Wheatley, A.K.