5JY0
Crystal structure of porphyromonas endodontalis dpp11 in complex with substrate
PDB DOI: 10.2210/pdb5jy0/pdb
Classification: HYDROLASE Organism(s): Streptococcus Agalactiae Lmg 15084 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2016-05-13 Deposition Author(s): Bezerra, G.A. , Cornaciu, I. , Djinovic-Carugo, K. , Hoffmann, G. , Marquez, J.A.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.599 Å
Crystal structure of porphyromonas endodontalis dpp11 in complex with substrate
Bezerra, G.A. , Cornaciu, I. , Djinovic-Carugo, K. , Hoffmann, G. , Marquez, J.A.
Primary Citation of Related Structures: 5JY0
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Asp/Glu-specific dipeptidyl-peptidase | A | 703 | Streptococcus Agalactiae Lmg 15084 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MDGGMWLMQQINGQVARMKSLGMQLEAADIYNPNGSSLKDAVVMFDGGCTGVLVSNQGLLLTNHHCGYDQIQKHSSVQHNYLKDGFWSYSLAEELVNPGLEVEIVDEITDVTAAVKKELERIKKPSGLEFLSPRYLSSLAPEIVGKKAASRPGYRYEIKAFYGGNRYYMFTKKVFRDVRLVAAPPSSIGKFGSDTDNWAWPRHTGDFSIFRLYADKNGNPAEYSKDNVPYRPKRWVKVNAQGVKEGDFALIMGYPGTTYKFFTADEVTEWSEIDNNIRIEMRGILQDVMLREMLADPKINIMYAAKYASSQNGYKRAQGANWAIRRRSLREIKLAQQQEVLAWAKQKGIATTEEAVRAISKAIEGRQDLRMRQRYLLEGILMGIEMSNAPAADSDIADHWDDPARREAGLQSIRKQFEAFFNKDYSPEVEKDQLAIALLTRYAERIPAEKQPISIREGIAEYGSAKAYVEMIFDKSIYASRERFEEFMKNPDRDRLLRDPMSRFAASVAYEHQKLAKEVAAFDAPLAAAQRSYVASVLDMKGQPNLAPDANLTLRFTYGEIKGYQPRDVVTYGAKSTLEGVMEKEDPNNWEYVVDPKLKALYEAKNYGRYANSDGSMPVNFCATTHTTGGNAGSPVMNARGELIGLNFDRNWEGVGGDIEYLPNYQRSIILDIRYLLFIIDKFAGCQRLIDEIQPQFHHHHHH |
| LEU-ASP-VAL | B | 3 | Streptococcus Agalactiae Lmg 15084 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | LDV |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2016-05-13 Deposition Author(s): Bezerra, G.A. , Cornaciu, I. , Djinovic-Carugo, K. , Hoffmann, G. , Marquez, J.A.