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5JWE

Crystal structure of h-2db in complex with the lcmv-derived gp92-101 peptide

PDB DOI: 10.2210/pdb5jwe/pdb

Classification: IMMUNE SYSTEM
Organism(s): Mus Musculus , Synthetic Construct

Deposited: 2016-05-12
Deposition Author(s): Achour, A. , Badia-Martinez, D. , Buratto, J. , Norstrom, M. , Sandalova, T.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.4 Å

Literature

Crystal structure of h-2db in complex with the lcmv-derived gp92-101 peptide

Achour, A. , Badia-Martinez, D. , Buratto, J. , Norstrom, M. , Sandalova, T.

Primary Citation of Related Structures: 5JWE


Proteins
Molecule Chains Sequence Length Organism Sequence
H-2 class I histocompatibility antigen, D-B alpha chain A 276 Mus Musculus , Synthetic Construct GPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPWMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSGCDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQSGAAEHYKAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVTLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVPLGKEQNYTCRVYHEGLPEPLTLRWEP
H-2 class I histocompatibility antigen, D-B alpha chain C 276 Mus Musculus , Synthetic Construct GPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPWMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSGCDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQSGAAEHYKAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVTLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVPLGKEQNYTCRVYHEGLPEPLTLRWEP
H-2 class I histocompatibility antigen, D-B alpha chain E 276 Mus Musculus , Synthetic Construct GPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPWMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSGCDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQSGAAEHYKAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVTLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVPLGKEQNYTCRVYHEGLPEPLTLRWEP
H-2 class I histocompatibility antigen, D-B alpha chain G 276 Mus Musculus , Synthetic Construct GPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPWMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSGCDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQSGAAEHYKAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVTLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVPLGKEQNYTCRVYHEGLPEPLTLRWEP
Beta-2-microglobulin B 99 Mus Musculus , Synthetic Construct IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYACRVKHDSMAEPKTVYWDRDM
Beta-2-microglobulin D 99 Mus Musculus , Synthetic Construct IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYACRVKHDSMAEPKTVYWDRDM
Beta-2-microglobulin F 99 Mus Musculus , Synthetic Construct IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYACRVKHDSMAEPKTVYWDRDM
Beta-2-microglobulin H 99 Mus Musculus , Synthetic Construct IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYACRVKHDSMAEPKTVYWDRDM
Pre-glycoprotein polyprotein GP complex P 10 Mus Musculus , Synthetic Construct CSANNSHHYI
Pre-glycoprotein polyprotein GP complex Q 10 Mus Musculus , Synthetic Construct CSANNSHHYI
Pre-glycoprotein polyprotein GP complex R 10 Mus Musculus , Synthetic Construct CSANNSHHYI
Pre-glycoprotein polyprotein GP complex S 10 Mus Musculus , Synthetic Construct CSANNSHHYI
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-05-12
Deposition Author(s): Achour, A. , Badia-Martinez, D. , Buratto, J. , Norstrom, M. , Sandalova, T.