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FASTA Sequence PDB Format mmCIF Format
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5JRG

Crystal structure of the nucleosome containing the dna with tetrahydrofuran (thf)

PDB DOI: 10.2210/pdb5jrg/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Homo Sapiens

Deposited: 2016-05-06
Deposition Author(s): Arimura, Y. , Horikoshi, N. , Kurumizaka, H. , Osakabe, A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.5 Å

5jrg
Literature

Crystal structure of the nucleosome containing the dna with tetrahydrofuran (thf)

Arimura, Y. , Horikoshi, N. , Kurumizaka, H. , Osakabe, A.

Primary Citation of Related Structures: 5JRG


Proteins
Molecule Chains Sequence Length Organism Sequence
Histone H3.1 A 139 Homo Sapiens GSHMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H3.1 E 139 Homo Sapiens GSHMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H4 B 106 Homo Sapiens GSHMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H4 F 106 Homo Sapiens GSHMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H2A type 1-B/E C 133 Homo Sapiens GSHMSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTESHHKAKGK
Histone H2A type 1-B/E G 133 Homo Sapiens GSHMSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTESHHKAKGK
Histone H2B type 1-J D 129 Homo Sapiens GSHMPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
Histone H2B type 1-J H 129 Homo Sapiens GSHMPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (145-MER) i 145 NA ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCTGAACCAGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTNTTGGTAGAATCTGCAGGTGGATATTGAT
DNA (145-MER) j 145 NA ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCTGGTTCAGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTNTTGGTAGAATCTGCAGGTGGATATTGAT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-05-06
Deposition Author(s): Arimura, Y. , Horikoshi, N. , Kurumizaka, H. , Osakabe, A.