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5JPQ
Cryo-em structure of the 90s pre-ribosome
PDB DOI: 10.2210/pdb5jpq/pdb
Classification: RIBOSOME Organism(s): Acinetobacter Sp. Anc 5600 , Pseudomonas Chlororaphis Subsp. Piscium
Deposited: 2016-05-04 Deposition Author(s): Beckmann, R. , Berninghausen, O. , Cheng, J. , Flemming, D. , Hurt, E. , Kornprobst, M. , Kos, M. , Kos-Braun, I.C. , Thoms, M. , Turk, M.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 7.3 Å
Cryo-em structure of the 90s pre-ribosome
Beckmann, R. , Berninghausen, O. , Cheng, J. , Flemming, D. , Hurt, E. , Kornprobst, M. , Kos, M. , Kos-Braun, I.C. , Thoms, M. , Turk, M.
Primary Citation of Related Structures: 5JPQ
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Bms1 | A | 1183 | Acinetobacter Sp. Anc 5600 , Pseudomonas Chlororaphis Subsp. Piscium | MEQSNKQHRKAKEKNTAKKKLHTQGHNAKAFAVAAPGKMARTMQRSSDVNERKLHVPMVDRTPEDDPPPFIVAVVGPPGTGKTTLIRSLVRRMTKSTLNDIQGPITVVSGKHRRLTFLECPADDLNAMIDIAKIADLVLLLIDGNFGFEMETMEFLNIAQHHGMPRVLGVATHLDLFKSQSTLRASKKRLKHRFWTEVYQGAKLFYLSGVINGRYPDREILNLSRFISVMKFRPLKWRNEHPYMLADRFTDLTHPELIETQGLQIDRKVAIYGYLHGTPLPSAPGTRVHIAGVGDFSVAQIEKLPDPCPTPFYQQKLDDFEREKMKEEAKANGEITTASTTRRRKRLDDKDKLIYAPMSDVGGVLMDKDAVYIDIGKKNEEPSFVPGQERGEGEKLMTGLQSVEQSIAEKFDGVGLQLFSNGTELHEVADHEGMDVESGEESIEDDEGKSKGRTSLRKPRIYGKPVQEEDADIDNLPSDEEPYTNDDDVQDSEPRMVEIDFNNTGEQGAEKLALETDSEFEESEDEFSWERTAANKLKKTESKKRTWNIGKLIYMDNISPEECIRRWRGEDDDSKDESDIEEDVDDDFFRKKDGTVTKEGNKDHAVDLEKFVPYFDTFEKLAKKWKSVDAIKERFLGAGILGNDNKTKSDSNEGGEELYGDFEDLEDGNPSEQAEDNSDKESEDEDENEDTNGDDDNSFTNFDAEEKKDLTMEQEREMNAAKKEKLRAQFEIEEGENFKEDDENNEYDTWYELQKAKISKQLEINNIEYQEMTPEQRQRIEGFKAGSYVRIVFEKVPMEFVKNFNPKFPIVMGGLLPTEIKFGIVKARLRRHRWHKKILKTNDPLVLSLGWRRFQTLPIYTTTDSRTRTRMLKYTPEHTYCNAAFYGPLCSPNTPFCGVQIVANSDTGNGFRIAATGIVEEIDVNIEIVKKLKLVGFPYKIFKNTAFIKDMFSSAMEVARFEGAQIKTVSGIRGEIKRALSKPEGHYRAAFEDKILMSDIVILRSWYPVRVKKFYNPVTSLLLKEKTEWKGLRLTGQIRAAMNLETPSNPDSAYHKIERVERHFNGLKVPKAVQKELPFKSQIHQMKPQKKKTYMAKRAVVLGGDEKKARSFIQKVLTISKAKDSKRKEQKASQRKERLKKLAKMEEEKSQRDKEKKKEYFAQNGKRTTMGGDDESRPRKMRR |
| Imp3 | B | 183 | Acinetobacter Sp. Anc 5600 , Pseudomonas Chlororaphis Subsp. Piscium | MVRKLKYHEQKLLKKHDFINYKSDNNHRDHDVIRRYMIQKPEDYHKYNRLCGSLRQFAHRLSLLPPDNEVRRKHETLLLDKLYDMGILSTKAKLSAVEHNVTVSAFARRRLPVVMTRLRMAETVQAATKLIEQGHVRVGVEEVRDPAFLVTRNMEDFVTWTVGSKIKQNIMKYRDKLDDFELL |
| Putative U3 small nucleolar ribonucleoprotein | C | 297 | Acinetobacter Sp. Anc 5600 , Pseudomonas Chlororaphis Subsp. Piscium | MLRKQARQRRDYLYRRALLLRDAEIAEKRAKLRAALASGKPLDPKIANDKELRKDFDYDVSRDIAKEQGEIDIDDEYSELSGIVDPRVLVTTSRDPSSRLMAFSKEIRLMFPTAIRLNRGNLILPDLVMSAQRERLSDIILLHEHRGTPTAITISHFPHGPTLMASLHNVVLRADIPKSIKGTVSESYPHLIFEGFRTPLGQRVVKILKHLFPPRDPTNNAKSGNRVITFVNQDDCIEVRHHVYVRTNYNSVELSEVGPRFTMRPFSITMGTLENKDADVEWHLSQYTRTGRKKNYF |
| Utp24 | D | 184 | Acinetobacter Sp. Anc 5600 , Pseudomonas Chlororaphis Subsp. Piscium | MGVKRIIGKQDERRKAEAVKKAEEEKRKKEKQAIREVPQMPSSMFFEHNEALVPPYNVLVDTNFLSRTVGAKLPLLESAMDCLYASVNIIITSCVMAELEKLGPRYRVALMIARDERWQRLTCDHKGTYADDCIVDRVQKHRIYIVATNDRDLKRRIRKIPGVPIMSVQKGKYAIERLPGAPAS |
| Emg1 | E | 252 | Acinetobacter Sp. Anc 5600 , Pseudomonas Chlororaphis Subsp. Piscium | MVEDSRVRDALKGGDQKALPASLVPQAPPVLTSKDKITKRMIVVLAMASLETHKISSNGPGGDKYVLLNCDDHQGLLKKMGRDISEARPDITHQCLLTLLDSPINKAGKLQVYIQTSRGILIEVNPTVRIPRTFKRFSGLMVQLLHKLSIRSVNSEEKLLKVIKNPITDHLPTKCRKVTLSFDAPVIRVQDYIEKLDDDESICVFVGAMARGKDNFADEYVDEKVGLSNYPLSASVACSKFCHGAEDAWNIL |
| Emg1 | F | 252 | Acinetobacter Sp. Anc 5600 , Pseudomonas Chlororaphis Subsp. Piscium | MVEDSRVRDALKGGDQKALPASLVPQAPPVLTSKDKITKRMIVVLAMASLETHKISSNGPGGDKYVLLNCDDHQGLLKKMGRDISEARPDITHQCLLTLLDSPINKAGKLQVYIQTSRGILIEVNPTVRIPRTFKRFSGLMVQLLHKLSIRSVNSEEKLLKVIKNPITDHLPTKCRKVTLSFDAPVIRVQDYIEKLDDDESICVFVGAMARGKDNFADEYVDEKVGLSNYPLSASVACSKFCHGAEDAWNIL |
| Kre33 | J | 1073 | Acinetobacter Sp. Anc 5600 , Pseudomonas Chlororaphis Subsp. Piscium | MTVQKTVDSRIPTLIRNGLQTKKRSFFVVVGDHAKEAIVHLYYIMSSMDVRQNKSVLWAYKKELLGFTSHRKKREAKIKKEIKRGIREPNQADPFELFISLNDIRYCYYKETDKILGNTYGMCILQDFEAITPNILARTIETVEGGGLVVLLLKGMTSLKQLYTMTMDVHARYRTEAHDDVIARFNERFLLSLGSCESCLVIDDELNVLPISGGKGVKPLPPPDEDEELSPAAKELKKIKDELEDTQPIGSLIKLARTVDQAKALLTFVDAIAEKTLRNTVTLTAARGRGKSAAMGVAIAAAVAYGYSNIFITSPSPENLKTLFEFVFKGFDALDYKDHADYTIIQSTNPEFNKAIVRVNIHRNHRQTIQYIRPQDAHVLGQAELVVIDEAAAIPLPLVKKLMGPYLVFMASTISGYEGTGRSLSLKLIKQLREQSRAGANPNGGNAVEVDRSTLKATKETTSVGGRSLKEITLSEPIRYAQGDNVEKWLNTLLCLDATLPRSKISTTGCPDPSQCELLHVNRDTLFSFHPVSEKFLQQMVALYVASHYKNSPNDLQLMSDAPAHELFVLTGPIQEGRLPEPLCVIQVSLEGKISKQSILKSLSRGQQPAGDLIPWLVSQQFQDDEFASLSGARIVRIATNPDYMSMGYGSKALQLLVDYYEGKFADLSEDAAAEVPRSIPRVTDAELSKGSLFDDIKVRDMHELPPLFSKLSERRPEKLDYVGVSYGLTQQLHKFWKRAQFVPVYLRQTANDLTGEHTCVMIRPLQDGNDPSWLGAFAADFHKRFLSLLSYKFREFPSILALTIEESANAGAMLDPSNAPTELTKAELDQLFTPFDHKRLESYANGLLDYHVVLDLMPTIAQLYFTGRLREAVKLSGLQQAILLALGLQRKDIDTLATELNLPGSQVLAIFMKIMRKVTQHFGALVSGAIAAELPDPNKTVGVSKENAMGIHDDEVVGLKFEALEQRLEDELDEGGDEALRELRKKQRELIDSLPLDQYEIDGDDDAWKEAEKRVASAAKSGKKVDGTLVSVPSAKAAKRKAEEMAALRDELEKMEKGKERGSKKAKKEKRR |
| Utp30 | K | 391 | Acinetobacter Sp. Anc 5600 , Pseudomonas Chlororaphis Subsp. Piscium | MAPSTAVAKKETDAVIPVDPDQTLKACKALLAHIKKAAAAPRPDGKQNLLADEESTVAETPIWLTLTTKKHIHDSHRLQPGKIILPHPLNTSEEISVCLITADPQRFYKNAVADEFPEDLRAKIGRVIDISHLKAKFKAYEAQRKLFSEHDVFLADTRIINRLPKALGKTFYKTTTKRPIPVVLMAQREKVNGKRVPAPKGKKEKRDPLENANARPIPEIVAEIRKAIGAALVHLSPSTNTAIKVGYANWEPEKLAANIETVIRELVERFVPQKWQNVRNFYVKGPETAALPIYQTDELWLDESKVVPDGQEPARALPGKREKANIGKKRKPLEDASQPALEETGKDERPKKKAKKTLPESNDDKLDKAIAERKEQLKKQKAAAKKVAADI |
| WD40 domain proteins | L | 1290 | Acinetobacter Sp. Anc 5600 , Pseudomonas Chlororaphis Subsp. Piscium | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
| WD40 domain proteins | N | 1290 | Acinetobacter Sp. Anc 5600 , Pseudomonas Chlororaphis Subsp. Piscium | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
| eS4 | P | 259 | Acinetobacter Sp. Anc 5600 , Pseudomonas Chlororaphis Subsp. Piscium | ARGPKKHLKRINAPKSWMLNKLGGIWATRPSQGPHKLRESLPLSVLLKERLNYALNGRDVTLILNDKEQNVFVDGKVRRDKGYPTGLMDVVRIEKTDQSFRILYDTKGRFVLKSLSKEEAKYKLLKVTAKAIGPNQIPYIVTHDSRTIRFPNPEIKIGDTLKYDLVNNKIENFAHLESGNVCYIQQGNNIGRVGIIQHIEKHQGSFDICHVKDAKGNAFATRLGNIFVLGQGKKSWIELPSGDGVRETILEERKRKFSY |
| uS11 | W | 137 | Acinetobacter Sp. Anc 5600 , Pseudomonas Chlororaphis Subsp. Piscium | MSNVVQARDNSQVFGVARIYASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCKEVGITAVHVKIRATGGTRTKTPGPGGQAALRALARSGLRIGRIEDVTPVPSDSTRKKGGRRGRRL |
| uS9 | X | 143 | Acinetobacter Sp. Anc 5600 , Pseudomonas Chlororaphis Subsp. Piscium | MSAVPSVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFSNIDIRVRVTGGGHVSQVYAIRQAIAKGLVAYHQKYVDEQSKNELKKAFTSYDRTLLIADSRRPEPKKFGGKGARSRFQKSYR |
| uS17 | Y | 157 | Acinetobacter Sp. Anc 5600 , Pseudomonas Chlororaphis Subsp. Piscium | MDTQIQRAYQKQDGVFLNSKKLLAKKTSAGVRYYKNIGLGFKTPKEAIEGTYVDKKCPFTSNLSIRGKIIKGLVISTKMNRTVIIRRDYLHYVRKYNRYEKRHRNIPVHISPCFSVKEGDILVAGQCRPISKTVRFNALQVVPNEIIGSVRKQFLLF |
| uS8 | Z | 130 | Acinetobacter Sp. Anc 5600 , Pseudomonas Chlororaphis Subsp. Piscium | MTRSSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHGYIGEFEYIDDHRSGKIVVQLNGRLNKCGVISPRFNVKIGDIEKWTANLLPARQFGYVILTTSAGIMDHEEARRKHVSGKILGFVY |
| UTP10 | G | 1802 | Acinetobacter Sp. Anc 5600 , Pseudomonas Chlororaphis Subsp. Piscium | MASSLAQQLAQIAANSRSSFNVKALKASHSKSLIWEPRVAVSQTFAEIYSQCYEGFKELCHLDSRFVPFDATLFSAQSQEVDRTQMTAEENAALDKRVDSFLHLVGSRLRLMPAIKAVEWLIRRFRIHEFNTGTLLATFLPYHTIPAFVTLLSILPVQRIPIEYRFLDPYIKSLTPPPRAAIVQQATNRPDLLSAISRYTLDSCRAKQEYPGLISFWGGIMAEAVNGMIDKMRSGRRAIQLENDHLLLQQIGPVLSEAMVMKDVPGIQIASYMVVAILAAKGSLNDNILTAFMEQLVHGWTVDTLRPGLVCLTMLAQHRSAKQLSGRVAKAVIKVPDLVSSLRDISKEHQVDKLANGLVLAFVDRLAKKGDIRTLPVINSLLLSELLQEKQAKVAYKALLLAAHKIDDNVDADGNIRKQVGSALVRLSQAEGDVGDAIRTAIQEVDFNIEELELKLGAAIRPKLAIEEAPEPSDEAMTVRPVDQRPSLDSTFERLSKLQPTATSCLAKDSESLFNDLCSVFLSAAVSESDLERFDATPVLSRPKAPSNSFYLSFYLRVWCGPYPTLAKVAALERVKTRLKEGDCVDKDFQAIFPYCIAALSDPAKKVRRAAADLVAVLGSAYKSLEKSQQLWAAKDLYGKTGTTSPLDKDALKALIRSVLIPCLEESVLHEDHVVAALVGALESSKDSENKNADKRHLSHSARLSIFKFLCGHVVETPLLAVKLRLLRSLNQIRRISGTTRTDLLLPLLRWWAGLSANEAAELAAQESVDVPAIDDAVVDVVVPNHAAGLEAFFQLVKEAIRPGLLQAIFARIAKMWPSMKSDTKYSTAKTLFELTQDPKLNAEQSDVITEAVEVLRKVDLTTDILHYFIDSLQDEVRLATEGPANKRRRVSTTEPGRGVGTQSSPELQAALSKTTFVLELVQESTPANHPELLPSLFTTLSDLHHLSAIVGSELGYLQNLVLSSLLAMMPTYKDNKDLTIDASVGHGDVLATCIQKSTSPAVINSALLLVASLARTAPDVVLQSVMPIFTFMGSSVLKQADDYSAHVVNQTIKEVIPPLIETFRKRGRNVVASAKDLLASFVTAYEHIPSHRKHNLFISLIQNLGPDDFLFAILAMFVDRYGATDNMITFMTQLISSFTVETQLQTLLKFLDLVGDLFKSKPTLSNVLLGGGSGLNGEQDIQKAATKQLNLLPHLLSNRRLKREIMQLAERDDMEAGKIRELYAALLEGILTVASTVKTKKTLHSRCGDALSNLLNLLSIAEFIKSVEALLDRPNIGLRQKVLRALELRVDSESSVDPKSREALLAFLPQLTAVIRESDDMNYKHTAVICVDKISEKYGKKDLDAVAAAATTIAGDYCLGQPSQSLRVMALLCLASLVDVLQDGIVPVLPVAIPKALSYLEQSVAEGGRDVELHNAAYAFMTALAQHIPYMITGNYLDRLLACSNASAAANLDDEANANRMQCLQFLAKLVDARVLYTGLHQNWASAAKFGFSAISEYLQILGIALDKHSKTVVVKNVSSLSSIFLSAMDLRRTVAAGDIASQISAMELDEIETKTHEDALKMVYKLNDAAFRPIFSKFVEWATTGLPKSDVTGRTYRLYVVFGFLDAFFGSLKSIVTGYASYIVDASVKALKAVDFAVPEERNLWKRVLCTLAKCFEHDQDGFWQAPAHFGAVAPVLVEQFLRAEGQVTATNVNDVIQDVVPAVVELAAAVESQEHYKEINTALLKHLRNGSPGVRLAVVKCQQAITAKLGEDWLHLLPEMLPYISELQDDDDEVVERENRRWIVGIEEKLGESLDSMLQ |
| UTP-A oligomerization domain | H | 920 | Acinetobacter Sp. Anc 5600 , Pseudomonas Chlororaphis Subsp. Piscium | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
| U3 small nucleolar RNA-associated protein 21 | I | 939 | Acinetobacter Sp. Anc 5600 , Pseudomonas Chlororaphis Subsp. Piscium | MSIDLKKRKVEEDVRSRGKNSKIFSPFRIIGNVSNGVPFATGTLGSTFYIVTCVGKTFQIYDANTLHLLFVSEKETPSSIVALSAHFHYVYAAYENKVGIYKRGIEEHLLELETDANVEHLCIFGDYLCASTDDNSIFIYKKSDPQDKYPSEFYTKLTVTEIQGGEIVSLQHLATYLNKLTVVTKSNVLLFNVRTGKLVFTSNEFPDQITTAEPAPVLDIIALGTVTGEVIMFNMRKGKRIRTIKIPQSRISSLSFRTDGSSHLSVGTSSGDLIFYDLDRRSRIHVLKNIHRESYGGVTQATFLNGQPIIVTSGGDNSLKEYVFDPSLSQGSGDVVVQPPRYLRSRGGHSQPPSYIAFADSQSHFMLSASKDRSLWSFSLRKDAQSQEMSQRLHKKQDGGRVGGSTIKSKFPEIVALAIENARIGEWENIITAHKDEKFARTWDMRNKRVGRWTFDTTDDGFVKSVAMSQCGNFGFIGSSNGSITIYNMQSGILRKKYKLHKRAVTGISLDGMNRKMVSCGLDGIVGFYDFNKSTLLGKLKLDAPITAMVYHRSSDLFALALDDLSIVVIDAVTQRVVRQLWGHSNRITAFDFSPEGRWIVSASLDSTIRTWDLPTGGCIDGIIVDNVATNVKFSPNGDLLATTHVTGNGICIWTNRAQFKTVSTRTIDESEFARMALPSTSVRGNDSMLSGALESNGGEDLNDIDFNTYTSLEQIDKELLTLSIGPRSKMNTLLHLDVIRKRSKPKEAPKKSEKLPFFLQLSGEKVGDEASVREGIAHETPEEIHRRDQEAQKKLDAEEQMNKFKVTGRLGFESHFTKQLREGSQSKDYSSLLATLINFSPAAVDLEIRSLNSFEPFDEIVWFIDALTQGLKSNKNFELYETFMSLLFKAHGDVIHANNKNQDIASALQNWEDVHKKEDRLDDLVKFCMGVAAFVTTA |
| WD40 domain proteins | O | 870 | Acinetobacter Sp. Anc 5600 , Pseudomonas Chlororaphis Subsp. Piscium | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
| UTP6 | Q | 456 | Acinetobacter Sp. Anc 5600 , Pseudomonas Chlororaphis Subsp. Piscium | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
| UTP-B oligomerisation domain | R | 560 | Acinetobacter Sp. Anc 5600 , Pseudomonas Chlororaphis Subsp. Piscium | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
| Pre mRNA splicing protein | S | 412 | Acinetobacter Sp. Anc 5600 , Pseudomonas Chlororaphis Subsp. Piscium | MMKIYLIEHVIGAVAYDENGNIVDYITNPRDLGKITEELLNNEKGIPFSATVELLKKVNPQEVVVENEAEVPKLQALGYRVSYEPYSKVSRIFRESLPKVAIDIKFASNEEDYYNFLHELSLEYTRRKLRSAAQKRDLLAIQAVRAMDDIDKTINLFSERLREWYSIHFPELDKLIEDHEEYATIVSRFGDRGFLTIDSLKELGFNEQRINRILDAAKKSIGADISEDDLSAMRMIANTILDLYNIRRNLNNYLEGVMKEVAPNVTALVGPALGARLLSIAGSLDELAKMPASTIQVLGAEKALFRALRSGGRPPKHGIIFQYPAIHTSPRWQRGKIARALAAKLAIAARVDAFSGRFIGDQLNEQLKKRIDEIKEKFAQPPPKKPQQQKPQQPQKQQAKGKKGGKRRGKRK |
| Pre mRNA splicing protein | T | 412 | Acinetobacter Sp. Anc 5600 , Pseudomonas Chlororaphis Subsp. Piscium | MMKIYLIEHVIGAVAYDENGNIVDYITNPRDLGKITEELLNNEKGIPFSATVELLKKVNPQEVVVENEAEVPKLQALGYRVSYEPYSKVSRIFRESLPKVAIDIKFASNEEDYYNFLHELSLEYTRRKLRSAAQKRDLLAIQAVRAMDDIDKTINLFSERLREWYSIHFPELDKLIEDHEEYATIVSRFGDRGFLTIDSLKELGFNEQRINRILDAAKKSIGADISEDDLSAMRMIANTILDLYNIRRNLNNYLEGVMKEVAPNVTALVGPALGARLLSIAGSLDELAKMPASTIQVLGAEKALFRALRSGGRPPKHGIIFQYPAIHTSPRWQRGKIARALAAKLAIAARVDAFSGRFIGDQLNEQLKKRIDEIKEKFAQPPPKKPQQQKPQQPQKQQAKGKKGGKRRGKRK |
| Snu13 | U | 130 | Acinetobacter Sp. Anc 5600 , Pseudomonas Chlororaphis Subsp. Piscium | MNAMSKASYVKFEVPQDLADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVIIAEDVQPEEIVAHLPLLCDEKKIPYVYVSSKKALGEACGLQVATASAAILEPGEAKDLVDEIIKRVNEIKGKTSS |
| Snu13 | V | 130 | Acinetobacter Sp. Anc 5600 , Pseudomonas Chlororaphis Subsp. Piscium | MNAMSKASYVKFEVPQDLADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVIIAEDVQPEEIVAHLPLLCDEKKIPYVYVSSKKALGEACGLQVATASAAILEPGEAKDLVDEIIKRVNEIKGKTSS |
| eS24 | 0 | 149 | Acinetobacter Sp. Anc 5600 , Pseudomonas Chlororaphis Subsp. Piscium | MTIVIRTKKILVNPLLSRRQLSLDVLHPDSPTASKEKIREELAKQLKVDARNVVVYGFSTQYGGGKSTGFALVYDNQQYLLKYEPNYRLRKVKILGEKPNTRRSFKELKRKIKRTSGKAITKLLSEKKGDTWASVQSKKSDHLKNFVAK |
| eS28 | 1 | 67 | Acinetobacter Sp. Anc 5600 , Pseudomonas Chlororaphis Subsp. Piscium | MDNKTPVTLAKVIKVLGRTGSRGGVTQVRVEFLEDTSRTIVRNVKGPVRENDILVLMESEREARRLR |
| WD40 domain proteins | M | 870 | Acinetobacter Sp. Anc 5600 , Pseudomonas Chlororaphis Subsp. Piscium | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 18S ribosomal RNA | 2 | 1800 | NA | UAUCUGGUUGAUCCUGCCAGUAGUCAUAUGCUUGUCUCAAAGAUUAAGCCAUGCAUGUCUAAGUAUAAGCAAUUUAUACAGUGAAACUGCGAAUGGCUCAUUAAAUCAGUUAUCGUUUAUUUGAUAGUUCCUUUACUACAUGGUAUAACUGUGGUAAUUCUAGAGCUAAUACAUGCUUAAAAUCUCGACCCUUUGGAAGAGAUGUAUUUAUUAGAUAAAAAAUCAAUGUCUUCGGACUCUUUGAUGAUUCAUAAUAACUUUUCGAAUCGCAUGGCCUUGUGCUGGCGAUGGUUCAUUCAAAUUUCUGCCCUAUCAACUUUCGAUGGUAGGAUAGUGGCCUACCAUGGUUUCAACGGGUAACGGGGAAUAAGGGUUCGAUUCCGGAGAGGGAGCCUGAGAAACGGCUACCACAUCCAAGGAAGGCAGCAGGCGCGCAAAUUACCCAAUCCUAAUUCAGGGAGGUAGUGACAAUAAAUAACGAUACAGGGCCCAUUCGGGUCUUGUAAUUGGAAUGAGUACAAUGUAAAUACCUUAACGAGGAACAAUUGGAGGGCAAGUCUGGUGCCAGCAGCCGCGGUAAUUCCAGCUCCAAUAGCGUAUAUUAAAGUUGUUGCAGUUAAAAAGCUCGUAGUUGAACUUUGGGCCCGGUUGGCCGGUCCGAUUUUUUCGUGUACUGGAUUUCCAACGGGGCCUUUCCUUCUGGCUAACCUUGAGUCCUUGUGGCUCUUGGCGAACCAGGACUUUUACUUUGAAAAAAUUAGAGUGUUCAAAGCAGGCGUAUUGCUCGAAUAUAUUAGCAUGGAAUAAUAGAAUAGGACGUUUGGUUCUAUUUUGUUGGUUUCUAGGACCAUCGUAAUGAUUAAUAGGGACGGUCGGGGGCAUCAGUAUUCAAUUGUCAGAGGUGAAAUUCUUGGAUUUAUUGAAGACUAACUACUGCGAAAGCAUUUGCCAAGGACGUUUUCAUUAAUCAAGAACGAAAGUUAGGGGAUCGAAGAUGAUCAGAUACCGUCGUAGUCUUAACCAUAAACUAUGCCGACUAGGGAUCGGGUGGUGUUUUUUUAAUGACCCACUCGGCACCUUACGAGAAAUCAAAGUCUUUGGGUUCUGGGGGGAGUAUGGUCGCAAGGCUGAAACUUAAAGGAAUUGACGGAAGGGCACCACCAGGAGUGGAGCCUGCGGCUUAAUUUGACUCAACACGGGGAAACUCACCAGGUCCAGACACAAUAAGGAUUGACAGAUUGAGAGCUCUUUCUUGAUUUUGUGGGUGGUGGUGCAUGGCCGUUCUUAGUUGGUGGAGUGAUUUGUCUGCUUAAUUGCGAUAACGAACGAGACCUUAACCUACUAAAUAGUGGUGCUAGCAUUUGCUGGUUAUCCACUUCUUAGAGGGACUAUCGGUUUCAAGCCGAUGGAAGUUUGAGGCAAUAACAGGUCUGUGAUGCCCUUAGACGUUCUGGGCCGCACGCGCGCUACACUGACGGAGCCAGCGAGUCUAACCUUGGCCGAGAGGUCUUGGUAAUCUUGUGAAACUCCGUCGUGCUGGGGAUAGAGCAUUGUAAUUAUUGCUCUUCAACGAGGAAUUCCUAGUAAGCGCAAGUCAUCAGCUUGCGUUGAUUACGUCCCUGCCCUUUGUACACACCGCCCGUCGCUAGUACCGAUUGAAUGGCUUAGUGAGGCCUCAGGAUCUGCUUAGAGAAGGGGGCAACUCCAUCUCAGAGCGGAGAAUUUGGACAAACUUGGUCAUUUAGAGGAACUAAAAGUCGUAACAAGGUUUCCGUAGGUGAACCUGCGGAAGGAUCAUUA |
| U3 RNA | 3 | 274 | NA | AGCGACAAUACUUCAGAGAAUCAUUUCUAUAGUAGUUGUCCUCUCUUGUGUUUCCUAAAGGAGCCACAGAUCCCACCCGGGUUGAUGAACGAGAUCCUCGGCGCCCAACAGUGAGGUCCAUUUUUUACUCUCGCUCUACCUGCAAAGGUGGCGGUCGCGUGCCUCGUCUCGCGGCUGUAUAGAGAGUGGCGAUGAUCUGUACCCCGGCUUUCCUGAGGUCUUGCCUUCGGGCGCUCAGGCGGGGUGGGUGUCGAUGGAAGUCUGACCGGCCAUU |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2016-05-04 Deposition Author(s): Beckmann, R. , Berninghausen, O. , Cheng, J. , Flemming, D. , Hurt, E. , Kornprobst, M. , Kos, M. , Kos-Braun, I.C. , Thoms, M. , Turk, M.