5JP3
Structure of xanthomonas campestris effector protein xopd bound to ubiquitin
PDB DOI: 10.2210/pdb5jp3/pdb
Classification: HYDROLASE Organism(s): Salmonella Enterica , Mus Musculus Polyomavirus 1
Deposited: 2016-05-03 Deposition Author(s): Komander, D. , Pruneda, J.N.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.9 Å
Structure of xanthomonas campestris effector protein xopd bound to ubiquitin
Primary Citation of Related Structures: 5JP3
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Xanthomonas outer protein D | A | 220 | Salmonella Enterica , Mus Musculus Polyomavirus 1 | GPHGTQTPMGYSAMTPERIDVDNLPSPQDVADPELPPVRATSWLLDGHLRAYTDDLARRLRGEPNAHLLHFADSQVVTMLSSADPDQQARAQRLLAGDDIPPIVFLPINQPNAHWSLLVVDRRNKDAVAAYHYDSMAQKDPQQRYLADMAAYHLGLDYQQTHEMPIAIQSDGYSCGDHVLTGIEVLAHRVLDGTFDYAGGRDLTDIEPDRGLIRDRLAQA |
| Xanthomonas outer protein D | C | 220 | Salmonella Enterica , Mus Musculus Polyomavirus 1 | GPHGTQTPMGYSAMTPERIDVDNLPSPQDVADPELPPVRATSWLLDGHLRAYTDDLARRLRGEPNAHLLHFADSQVVTMLSSADPDQQARAQRLLAGDDIPPIVFLPINQPNAHWSLLVVDRRNKDAVAAYHYDSMAQKDPQQRYLADMAAYHLGLDYQQTHEMPIAIQSDGYSCGDHVLTGIEVLAHRVLDGTFDYAGGRDLTDIEPDRGLIRDRLAQA |
| Xanthomonas outer protein D | E | 220 | Salmonella Enterica , Mus Musculus Polyomavirus 1 | GPHGTQTPMGYSAMTPERIDVDNLPSPQDVADPELPPVRATSWLLDGHLRAYTDDLARRLRGEPNAHLLHFADSQVVTMLSSADPDQQARAQRLLAGDDIPPIVFLPINQPNAHWSLLVVDRRNKDAVAAYHYDSMAQKDPQQRYLADMAAYHLGLDYQQTHEMPIAIQSDGYSCGDHVLTGIEVLAHRVLDGTFDYAGGRDLTDIEPDRGLIRDRLAQA |
| Xanthomonas outer protein D | G | 220 | Salmonella Enterica , Mus Musculus Polyomavirus 1 | GPHGTQTPMGYSAMTPERIDVDNLPSPQDVADPELPPVRATSWLLDGHLRAYTDDLARRLRGEPNAHLLHFADSQVVTMLSSADPDQQARAQRLLAGDDIPPIVFLPINQPNAHWSLLVVDRRNKDAVAAYHYDSMAQKDPQQRYLADMAAYHLGLDYQQTHEMPIAIQSDGYSCGDHVLTGIEVLAHRVLDGTFDYAGGRDLTDIEPDRGLIRDRLAQA |
| Polyubiquitin-B | B | 76 | Salmonella Enterica , Mus Musculus Polyomavirus 1 | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGX |
| Polyubiquitin-B | D | 76 | Salmonella Enterica , Mus Musculus Polyomavirus 1 | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGX |
| Polyubiquitin-B | H | 76 | Salmonella Enterica , Mus Musculus Polyomavirus 1 | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGX |
| Polyubiquitin-B | F | 76 | Salmonella Enterica , Mus Musculus Polyomavirus 1 | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGX |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2016-05-03 Deposition Author(s): Komander, D. , Pruneda, J.N.