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5IP2

Tomato spotted wilt tospovirus nucleocapsid protein-ssrna complex

PDB DOI: 10.2210/pdb5ip2/pdb

Classification: VIRAL PROTEIN/RNA
Organism(s): Tomato Spotted Wilt Virus , Synthetic Construct

Deposited: 2016-03-09
Deposition Author(s): Komoda, K. , Narita, M. , Tanaka, I. , Yamashita, K. , Yao, M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.3 Å

5ip2
Literature

Tomato spotted wilt tospovirus nucleocapsid protein-ssrna complex

Komoda, K. , Narita, M. , Tanaka, I. , Yamashita, K. , Yao, M.

Primary Citation of Related Structures: 5IP2


Proteins
Molecule Chains Sequence Length Organism Sequence
Nucleoprotein B 279 Tomato Spotted Wilt Virus , Synthetic Construct MNHKHHHHHHSSGENLYFQGHMSKVKLTKENIVALLTQGKDLEFEENQNLVAFNFKTFCLENLDQIKKMSIISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSDRIGATDMTFRRLDSLIRVRLVEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMISVVLAIYQDAKYKDLGIDPKKYDTKEALGKVCTVLKSKAFEMNEDQVKKGKEYAAILSSSNPNAKGSVAMEHYSETLNKFYEMFGVKKQAKLAELA
Nucleoprotein C 279 Tomato Spotted Wilt Virus , Synthetic Construct MNHKHHHHHHSSGENLYFQGHMSKVKLTKENIVALLTQGKDLEFEENQNLVAFNFKTFCLENLDQIKKMSIISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSDRIGATDMTFRRLDSLIRVRLVEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMISVVLAIYQDAKYKDLGIDPKKYDTKEALGKVCTVLKSKAFEMNEDQVKKGKEYAAILSSSNPNAKGSVAMEHYSETLNKFYEMFGVKKQAKLAELA
Nucleoprotein A 279 Tomato Spotted Wilt Virus , Synthetic Construct MNHKHHHHHHSSGENLYFQGHMSKVKLTKENIVALLTQGKDLEFEENQNLVAFNFKTFCLENLDQIKKMSIISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSDRIGATDMTFRRLDSLIRVRLVEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMISVVLAIYQDAKYKDLGIDPKKYDTKEALGKVCTVLKSKAFEMNEDQVKKGKEYAAILSSSNPNAKGSVAMEHYSETLNKFYEMFGVKKQAKLAELA

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') e 19 NA UUUUUUUUUUUUUUUUUUU
RNA (5'-D(P*UP*UP*U)-3') f 3 NA UUU
RNA (5'-D(P*UP*UP*U)-3') d 3 NA UUU
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-03-09
Deposition Author(s): Komoda, K. , Narita, M. , Tanaka, I. , Yamashita, K. , Yao, M.