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5INK

Mouse tdp2 reaction product (5'-phosphorylated dna)-abasic/thf-mg2+ complex

PDB DOI: 10.2210/pdb5ink/pdb

Classification: hydrolase/dna
Organism(s): Mus Musculus , Synthetic Construct

Deposited: 2016-03-07
Deposition Author(s): Schellenberg, M.J. , Williams, R.S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.15 Å

5ink
Literature

Mouse tdp2 reaction product (5'-phosphorylated dna)-abasic/thf-mg2+ complex

Schellenberg, M.J. , Williams, R.S.

Primary Citation of Related Structures: 5INK


Proteins
Molecule Chains Sequence Length Organism Sequence
Tyrosyl-DNA phosphodiesterase 2 A 256 Mus Musculus , Synthetic Construct SKGLEDSSTISFITWNIDGLDGCNLPERARGVCSCLALYSPDVVFLQEVIPPYCAYLKKRAASYTIITGNEEGYFTAILLKKGRVKFKSQEIIPFPNTKMMRNLLCVNVSLGGNEFCLMTSHLESTREHSAERIRQLKTVLGKMQEAPDSTTVIFAGDTNLRDQEVIKCGGLPDNVFDAWEFLGKPKHCQYTWDTKANNNLRIPAAYKHRFDRIFFRAEEGHLIPQSLDLVGLEKLDCGRFPSDHWGLLCTLNVVL
Tyrosyl-DNA phosphodiesterase 2 B 256 Mus Musculus , Synthetic Construct SKGLEDSSTISFITWNIDGLDGCNLPERARGVCSCLALYSPDVVFLQEVIPPYCAYLKKRAASYTIITGNEEGYFTAILLKKGRVKFKSQEIIPFPNTKMMRNLLCVNVSLGGNEFCLMTSHLESTREHSAERIRQLKTVLGKMQEAPDSTTVIFAGDTNLRDQEVIKCGGLPDNVFDAWEFLGKPKHCQYTWDTKANNNLRIPAAYKHRFDRIFFRAEEGHLIPQSLDLVGLEKLDCGRFPSDHWGLLCTLNVVL

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(P*(3DR)P*CP*GP*AP*AP*TP*TP*CP*G)-3') c 9 NA NCGAATTCG
DNA (5'-D(P*(3DR)P*CP*GP*AP*AP*TP*TP*CP*G)-3') d 9 NA NCGAATTCG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-03-07
Deposition Author(s): Schellenberg, M.J. , Williams, R.S.