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5IIM

Crystal structure of the pre-catalytic ternary extension complex of dna polymerase lambda with an 8-oxo-dg:da base-pair

PDB DOI: 10.2210/pdb5iim/pdb

Classification: TRANSFERASE/DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2016-03-01
Deposition Author(s): Burak, M.J. , Garcia-Diaz, M. , Guja, K.E.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.941 Å

5iim
Literature

Crystal structure of the pre-catalytic ternary extension complex of dna polymerase lambda with an 8-oxo-dg:da base-pair

Burak, M.J. , Garcia-Diaz, M. , Guja, K.E.

Primary Citation of Related Structures: 5IIM


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase lambda A 334 Homo Sapiens , Synthetic Construct AQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(P*GP*CP*CP*G)-3') d 4 NA GCCG
DNA (5'-D(*CP*AP*GP*TP*AP*A)-3') p 6 NA CAGTAA
DNA (5'-D(*CP*GP*GP*CP*AP*(8OG)P*TP*AP*CP*TP*G)-3') t 11 NA CGGCAGTACTG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-03-01
Deposition Author(s): Burak, M.J. , Garcia-Diaz, M. , Guja, K.E.