5IFJ
Crystal structure of anti-gliadin 1002-1e01 fab fragment in complex of peptide plqpeqpfp
PDB DOI: 10.2210/pdb5ifj/pdb
Classification: IMMUNE SYSTEM Organism(s): Homo Sapiens , Synthetic Construct
Deposited: 2016-02-26 Deposition Author(s): Chen, X. , Du Pre, M.F. , Gidoni, M. , Lundin, K.E. , Snir, O. , Sollid, L.M. , Steinsbo, O. , Yaari, G. , Zhao, Y.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.35 Å
Crystal structure of anti-gliadin 1002-1e01 fab fragment in complex of peptide plqpeqpfp
Chen, X. , Du Pre, M.F. , Gidoni, M. , Lundin, K.E. , Snir, O. , Sollid, L.M. , Steinsbo, O. , Yaari, G. , Zhao, Y.
Primary Citation of Related Structures: 5IFJ
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 1E01 Fab fragment heavy chain | A | 227 | Homo Sapiens , Synthetic Construct | EVQLLESGGGLVQPGGSLRLSCAASGFTFSTYAMSWVRQAPGKGLEWVSGISGSGGSTYYADSVKGRFTTSRDNSKNTLYLQMNSLRAEDTAVYYCAKFSGKDCSGTSCRDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD |
| 1E01 Fab fragment heavy chain | D | 227 | Homo Sapiens , Synthetic Construct | EVQLLESGGGLVQPGGSLRLSCAASGFTFSTYAMSWVRQAPGKGLEWVSGISGSGGSTYYADSVKGRFTTSRDNSKNTLYLQMNSLRAEDTAVYYCAKFSGKDCSGTSCRDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD |
| 1E01 Fab fragment heavy chain | G | 227 | Homo Sapiens , Synthetic Construct | EVQLLESGGGLVQPGGSLRLSCAASGFTFSTYAMSWVRQAPGKGLEWVSGISGSGGSTYYADSVKGRFTTSRDNSKNTLYLQMNSLRAEDTAVYYCAKFSGKDCSGTSCRDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD |
| 1E01 Fab fragment heavy chain | J | 227 | Homo Sapiens , Synthetic Construct | EVQLLESGGGLVQPGGSLRLSCAASGFTFSTYAMSWVRQAPGKGLEWVSGISGSGGSTYYADSVKGRFTTSRDNSKNTLYLQMNSLRAEDTAVYYCAKFSGKDCSGTSCRDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD |
| 1E01 Fab fragment light chain | B | 216 | Homo Sapiens , Synthetic Construct | QLVLTQSPSASASLGASVRLTCTLSSGHSSYVIAWHQQQSEKGPRYLMKVNSDGSHSKGDGIPDRFSGSSSGAERYLTISSLQSEDEADYYCQTWGAGILVFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC |
| 1E01 Fab fragment light chain | E | 216 | Homo Sapiens , Synthetic Construct | QLVLTQSPSASASLGASVRLTCTLSSGHSSYVIAWHQQQSEKGPRYLMKVNSDGSHSKGDGIPDRFSGSSSGAERYLTISSLQSEDEADYYCQTWGAGILVFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC |
| 1E01 Fab fragment light chain | H | 216 | Homo Sapiens , Synthetic Construct | QLVLTQSPSASASLGASVRLTCTLSSGHSSYVIAWHQQQSEKGPRYLMKVNSDGSHSKGDGIPDRFSGSSSGAERYLTISSLQSEDEADYYCQTWGAGILVFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC |
| 1E01 Fab fragment light chain | K | 216 | Homo Sapiens , Synthetic Construct | QLVLTQSPSASASLGASVRLTCTLSSGHSSYVIAWHQQQSEKGPRYLMKVNSDGSHSKGDGIPDRFSGSSSGAERYLTISSLQSEDEADYYCQTWGAGILVFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC |
| peptide PRO-LEU-GLN-PRO-GLU-GLN-PRO-PHE-PRO | C | 9 | Homo Sapiens , Synthetic Construct | PLQPEQPFP |
| peptide PRO-LEU-GLN-PRO-GLU-GLN-PRO-PHE-PRO | F | 9 | Homo Sapiens , Synthetic Construct | PLQPEQPFP |
| peptide PRO-LEU-GLN-PRO-GLU-GLN-PRO-PHE-PRO | I | 9 | Homo Sapiens , Synthetic Construct | PLQPEQPFP |
| peptide PRO-LEU-GLN-PRO-GLU-GLN-PRO-PHE-PRO | L | 9 | Homo Sapiens , Synthetic Construct | PLQPEQPFP |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2016-02-26 Deposition Author(s): Chen, X. , Du Pre, M.F. , Gidoni, M. , Lundin, K.E. , Snir, O. , Sollid, L.M. , Steinsbo, O. , Yaari, G. , Zhao, Y.