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FASTA Sequence PDB Format mmCIF Format
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5HQ2

Structural model of set8 histone h4 lys20 methyltransferase bound to nucleosome core particle

PDB DOI: 10.2210/pdb5hq2/pdb

Classification: Transferase/DNA
Organism(s): Homo Sapiens , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Synthetic Construct , Xenopus Laevis

Deposited: 2016-01-21
Deposition Author(s): Mcginty, R.K. , Tan, S. , Tavarekere, G.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 4.5 Å

5hq2
Literature

Structural model of set8 histone h4 lys20 methyltransferase bound to nucleosome core particle

Mcginty, R.K. , Tan, S. , Tavarekere, G.

Primary Citation of Related Structures: 5HQ2


Proteins
Molecule Chains Sequence Length Organism Sequence
Histone H3.2 A 135 Homo Sapiens , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Synthetic Construct , Xenopus Laevis ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H4 B 102 Homo Sapiens , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Synthetic Construct , Xenopus Laevis SGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H2A G 129 Homo Sapiens , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Synthetic Construct , Xenopus Laevis SGRGKQGGKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKKTESSKSAKSK
Histone H2B 1.1 H 122 Homo Sapiens , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Synthetic Construct , Xenopus Laevis AKSAPAPKKGSKKAVTKTQKKDGKKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
Guanine nucleotide exchange factor SRM1 K 483 Homo Sapiens , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Synthetic Construct , Xenopus Laevis GSVKRTVATNGDASGAHRAKKMSKTHASHIINAQEDYKHMYLSVQPLDIFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNVWSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGHKVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPFGLRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKFKSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFEDDTEVPTRIKNTATQDHNIILVGCGGQFSVSGGVKLSDEDAEKRADEMDD
N-lysine methyltransferase SETD8 M 202 Homo Sapiens , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Synthetic Construct , Xenopus Laevis GSAKQALKKPIKGKQAPRKKAQGKTQQNRKLTDFYPVRRSSRKSKAELQSEERKRIDELIESGKEEGMKIDLIDGKGRGVIATKQFSRGDFVVEYHGDLIEITDAKKREALYAQDPSTGCYMYYFQYLSKTYCVDATRETNRLGRLINHSKCGNCQTKLHDIDGVPHLILIASRDIAAGEELLYDYGDRSKASIEAFPWLKH

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (149-MER) i 149 NA ATCGGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTTAAACGCACGTACGCGCTGTCCCCCGCGTTTTAACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATCCTGAT
DNA (149-MER) j 149 NA ATCAGGATGTATATATCTGACACGTGCCTGGAGACTAGGGAGTAATCCCCTTGGCGGTTAAAACGCGGGGGACAGCGCGTACGTGCGTTTAAGCGGTGCTAGAGCTGTCTACGACCAATTGAGCGGCCTCGGCACCGGGATTCTCCGAT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-01-21
Deposition Author(s): Mcginty, R.K. , Tan, S. , Tavarekere, G.