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5HLT

Crystal structure of pyrene- and phenanthrene-modified dna in complex with the bpuj1 endonuclease binding domain

PDB DOI: 10.2210/pdb5hlt/pdb

Classification: HYDROLASE
Organism(s): Bacillus Pumilus , Synthetic Construct

Deposited: 2016-01-15
Deposition Author(s): Aeschimann, W. , Chau, T.-T.-H. , Haener, R. , Langenegger, S.M. , Probst, M. , Stocker, A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.672 Å

5hlt
Literature

Crystal structure of pyrene- and phenanthrene-modified dna in complex with the bpuj1 endonuclease binding domain

Aeschimann, W. , Chau, T.-T.-H. , Haener, R. , Langenegger, S.M. , Probst, M. , Stocker, A.

Primary Citation of Related Structures: 5HLT


Proteins
Molecule Chains Sequence Length Organism Sequence
Restriction endonuclease R.BpuJI A 288 Bacillus Pumilus , Synthetic Construct GSHMNYNPEEQFRCTIIRGKAKNMLDNLLPAYANIIDDICPCDKASFVKDFNNRLIEILGEETTKKTLDNHRTEIAGKLFGMFYEDDEVIFPSGRTNKYIEDSDQPAFFKDICFKFQFPNGMDKLDKVIEKVGAKIQIRQFPYILQVLLTADNNNIQLSKDDIAYYVLNSLQVLQGKIKPIEVIEKIIEDRSNDITKKVRHPGKETSYSMQHIREQLNYLELANLIRIDGNLVKLNYREAENINYIAQFWGNKPEFNAYKYDFTSEDDKKSFFKDWQQYYSNVNSHKS
Restriction endonuclease R.BpuJI B 288 Bacillus Pumilus , Synthetic Construct GSHMNYNPEEQFRCTIIRGKAKNMLDNLLPAYANIIDDICPCDKASFVKDFNNRLIEILGEETTKKTLDNHRTEIAGKLFGMFYEDDEVIFPSGRTNKYIEDSDQPAFFKDICFKFQFPNGMDKLDKVIEKVGAKIQIRQFPYILQVLLTADNNNIQLSKDDIAYYVLNSLQVLQGKIKPIEVIEKIIEDRSNDITKKVRHPGKETSYSMQHIREQLNYLELANLIRIDGNLVKLNYREAENINYIAQFWGNKPEFNAYKYDFTSEDDKKSFFKDWQQYYSNVNSHKS

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*GP*YPY*TP*AP*CP*CP*CP*GP*TP*GP*GP*A)-3') l 12 NA GXTACCCGTGGA
DNA (5'-D(*GP*YPY*TP*AP*CP*CP*CP*GP*TP*GP*GP*A)-3') c 12 NA GXTACCCGTGGA
DNA (5'-D(*TP*CP*CP*AP*CP*GP*GP*GP*TP*AP*YPY*C)-3') m 12 NA TCCACGGGTAXC
DNA (5'-D(*TP*CP*CP*AP*CP*GP*GP*GP*TP*AP*YPY*C)-3') d 12 NA TCCACGGGTAXC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-01-15
Deposition Author(s): Aeschimann, W. , Chau, T.-T.-H. , Haener, R. , Langenegger, S.M. , Probst, M. , Stocker, A.