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FASTA Sequence PDB Format mmCIF Format
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5HGB

Hla*a2402 complexed with hiv nef138 8mer epitope

PDB DOI: 10.2210/pdb5hgb/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2016-01-08
Deposition Author(s): Gao, G.F. , Qi, J. , Shi, Y.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.4 Å

5hgb
Literature

Hla*a2402 complexed with hiv nef138 8mer epitope

Gao, G.F. , Qi, J. , Shi, Y.

Primary Citation of Related Structures: 5HGB


Proteins
Molecule Chains Sequence Length Organism Sequence
HLA class I histocompatibility antigen, A-24 alpha chain A 275 Homo Sapiens , Synthetic Construct MGSHSMRYFSTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDEETGKVKAHSQTDRENLRIALRYYNQSEAGSHTLQMMFGCDVGSDGRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQITKRKWEAAHVAEQQRAYLEGTCVDGLRRYLENGKETLQRTDPPKTHMTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW
HLA class I histocompatibility antigen, A-24 alpha chain D 275 Homo Sapiens , Synthetic Construct MGSHSMRYFSTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDEETGKVKAHSQTDRENLRIALRYYNQSEAGSHTLQMMFGCDVGSDGRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQITKRKWEAAHVAEQQRAYLEGTCVDGLRRYLENGKETLQRTDPPKTHMTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW
HLA class I histocompatibility antigen, A-24 alpha chain G 275 Homo Sapiens , Synthetic Construct MGSHSMRYFSTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDEETGKVKAHSQTDRENLRIALRYYNQSEAGSHTLQMMFGCDVGSDGRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQITKRKWEAAHVAEQQRAYLEGTCVDGLRRYLENGKETLQRTDPPKTHMTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW
HLA class I histocompatibility antigen, A-24 alpha chain J 275 Homo Sapiens , Synthetic Construct MGSHSMRYFSTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDEETGKVKAHSQTDRENLRIALRYYNQSEAGSHTLQMMFGCDVGSDGRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQITKRKWEAAHVAEQQRAYLEGTCVDGLRRYLENGKETLQRTDPPKTHMTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW
Beta-2-microglobulin B 100 Homo Sapiens , Synthetic Construct MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM
Beta-2-microglobulin E 100 Homo Sapiens , Synthetic Construct MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM
Beta-2-microglobulin H 100 Homo Sapiens , Synthetic Construct MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM
Beta-2-microglobulin K 100 Homo Sapiens , Synthetic Construct MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM
Protein Nef C 8 Homo Sapiens , Synthetic Construct RYPLTFGW
Protein Nef F 8 Homo Sapiens , Synthetic Construct RYPLTFGW
Protein Nef I 8 Homo Sapiens , Synthetic Construct RYPLTFGW
Protein Nef L 8 Homo Sapiens , Synthetic Construct RYPLTFGW
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-01-08
Deposition Author(s): Gao, G.F. , Qi, J. , Shi, Y.