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5HCH

X-ray structure of a lectin-bound dna duplex containing an unnatural phenanthrenyl pair

PDB DOI: 10.2210/pdb5hch/pdb

Classification: SUGAR BINDING PROTEIN
Organism(s): Vibrio Nigripulchritudo , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2016-01-04
Deposition Author(s): Istrate, A. , Leumann, C.J. , Marcaida Lopez, M.J. , Roethlisberger, P. , Stocker, A. , Visini, R.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.9 Å

Literature

X-ray structure of a lectin-bound dna duplex containing an unnatural phenanthrenyl pair

Istrate, A. , Leumann, C.J. , Marcaida Lopez, M.J. , Roethlisberger, P. , Stocker, A. , Visini, R.

Primary Citation of Related Structures: 5HCH


Proteins
Molecule Chains Sequence Length Organism Sequence
Fucose-binding lectin A 114 Vibrio Nigripulchritudo , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) ATQGVFTLPANTRFGVTAFANSSGTQTVNVLVNNETAATFSGQSTNNAVIGTQVLNSGSSGKVQVQVSVNGRPSDLVSAQVILTNELNFALVGSEDGTDNDYNDAVVVINWPLG

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*CP*GP*CP*AP*TP*TP*(DF)P*TP*AP*TP*CP*GP*C)-3') b 13 NA CGCATTXTATCGC
DNA (5'-D(P*GP*CP*GP*AP*TP*AP*(DF)P*AP*AP*TP*GP*CP*G)-3') e 13 NA GCGATAXAATGCG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-01-04
Deposition Author(s): Istrate, A. , Leumann, C.J. , Marcaida Lopez, M.J. , Roethlisberger, P. , Stocker, A. , Visini, R.