PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

5H0R

Rna dependent rna polymerase ,vp4,dsrna

PDB DOI: 10.2210/pdb5h0r/pdb

Classification: TRANSFERASE/RNA
Organism(s): Acremonium Chrysogenum (Strain Atcc 11550 / Cbs 779.69 / Dsm 880 / Jcm 23072 / Imi 49137) , Escherichia Coli O145:Nm , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2016-10-06
Deposition Author(s): Chen, W. , Cheng, L. , Li, X. , Liu, H. , Wang, J. , Wang, X. , Xu, B. , Zhou, N. , Zhu, B.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.9 Å

5h0r
Literature

Rna dependent rna polymerase ,vp4,dsrna

Chen, W. , Cheng, L. , Li, X. , Liu, H. , Wang, J. , Wang, X. , Xu, B. , Zhou, N. , Zhu, B.

Primary Citation of Related Structures: 5H0R


Proteins
Molecule Chains Sequence Length Organism Sequence
RNA-dependent RNA polymerase F 1225 Acremonium Chrysogenum (Strain Atcc 11550 / Cbs 779.69 / Dsm 880 / Jcm 23072 / Imi 49137) , Escherichia Coli O145:Nm , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MLPNTKLHNTIFSETRKFTRESFKEIEHLTARLANDSVARHDFLFNTSIALISDYSGEDSNGNQLQATITIPNEIINPKEYDPSDYPLAEDESFFKQGHKYDYLVTFRAGSLTNTYEPKTKMYKLHAALDKLMHVRQRKSRFADLWRELCAVIASLDVWYQTTNYPLRTYVKLLFHRGDEFPFYESPSQDRIIFNDKSVASILPTFVYTCCQVGTAIMSGILTHVESIVAMNHFLHCAKDSYIDEKLKIKGIGRSWYQEALHNVGQATVPVWSQFNEVIGHRRKSTSEPHFVSSTFISLRAKRAELLYPEFNAYINRAIQLSKTQNDVANYYAACRAMTNDGTFLATLTELSLDAAVFPRIEQRLVTRPAVLMSNTRHESLKQKYTNGVGSIAQSYLSSFTDEIAKRVNGIHHDEAWLNFLTTSSPGRKLTEIEKLEVGGDVAAWSNSRIVMQAVFAREYRTPERIFKSLKAPIKLVERQQSDRRQRAISGLDNDRLFLSFMPYTIGKQIYELNDNAAQGKQAGNAFDIGEMLYWTSQRNVLLSSIDVAGMDASVTTNTKDIYNTFVLDVASKCTVPRFGPYYAKNMEVFEVGKRQSQVRYVNAAWQACALEAADSQTSTSYESEIFGQVKNAEGTYPSGRADTSTHHTVLLQGLVRGNELKRASDGKNSCLATIKILGDDIMEIFQGSESDTYDHAMSNANILNESGFATTAELSQNSIVLLQQLVVNGTFWGFADRISLWTREDTKDIGRLNLAMMELNALIDDLVFRVRRPEGLKMLGFFCGAICLRRFTLSVDNKLYDSTYNNLSKYMTLIKYDKNPDFDSTLMSLILPLAWLFMPRGGEYPAYPFERRDGTFTEDESMFTARGAYKRRLLYDVSNIREMIQQNSMALDDDLLHEYGFTGALLLIDLNILDLIDEVKKEDISPVKVSELATSLEQLGKLGEREKSRRAASDLKIRGHALSNDIVYGYGLQEKIQKSAMATKETTVQSKRVSSRLHDVIVAKTRDYKISTIPADALRLHEFEVEDVTVDLLPHAKHTSYSSLAYNMSFGSDGWFAFALLGGLDRSANLLRLDVASIRGNYHKFSYDDPVFKQGYKIYKSDATLLNDFFTAISAGPKEQGILLRAFAYYSLYGNVEYHYVLSPRQLFFLSDNPVSAERLVRIPPKYYVSTQCRALYNIFSYLHILRSIANNWGKRLKMVLHPGLIAYVRGTSQGAILPEADNV
VP4 protein G 561 Acremonium Chrysogenum (Strain Atcc 11550 / Cbs 779.69 / Dsm 880 / Jcm 23072 / Imi 49137) , Escherichia Coli O145:Nm , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MFAIDPLKHPKLYEEYGLYLRPHQINQEIKPTTIKKKELAPTIRSIKYASLIHSMLAKHAARHNGTLINPRMYADMITLGNTKVTVTKGTPKAQIDTLKMNGLTVVSKSRRNNKKKPVSDTTASTDETTDDVVTYKALTEMSTLVESFRLPSGLTLIVFDDEKYQSLIPDYINQLITYTQPHIIPTWQGITDFSDTYLRSYFKRPFELTASNLAVPQKHNLSPITRSIFNNTGREDAIIRKLYGYGEYVFIKYEGCLITWTGLYGAVTMMVNLPKRDLGLDVGDDFLKEYKKLLFHGVITDAIPSGISAKSTVMRISPHKMMNPSGGALAVLSKYIEAVVSTNVINATLVVYAEKGAGKTSFLSTYAQQLSLASGQIVGHLSSDAYGRWLAKNKDVEEPSFEYDYVLSLDTDDNESYYEQKASELLTSHGISELSQYELLSVRRKVKMMNEMDEILIAQLDNANTHSERNFYYMVSTGKNTPRTLIVEGHFNAQDATIARTDTTILLRTINDTTQAMRDRQRSGVVQLFLRDTYYRLLPSLHTTVYPFEMLESIKRWKWVH

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (42-MER) h 42 NA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
RNA (42-MER) i 42 NA UUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUU
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2016-10-06
Deposition Author(s): Chen, W. , Cheng, L. , Li, X. , Liu, H. , Wang, J. , Wang, X. , Xu, B. , Zhou, N. , Zhu, B.