5GZO
Structure of neutralizing antibody bound to zika envelope protein
PDB DOI: 10.2210/pdb5gzo/pdb
Classification: VIRAL PROTEIN/IMMUNE SYSTEM Organism(s): Homo Sapiens , Zika Virus
Deposited: 2016-09-29 Deposition Author(s): Bi, Y. , Cheng, G. , Dai, L. , Gao, G.F. , Griffin, B. , He, J. , Kobinger, G. , Li, J. , Li, J. , Li, S. , Liang, M. , Liao, Y. , Liu, J. , Liu, S. , Liu, X. , Ma, T. , Peng, R. , Qi, J. , Qiu, X. , Shi, Y. , Song, J. , Tong, Z. , Wang, P. , Wang, Q. , Wong, G. , Xiong, Y. , Xu, X. , Yan, J. , Yang, H. , Yang, J. , Yuan, H.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.755 Å
Structure of neutralizing antibody bound to zika envelope protein
Bi, Y. , Cheng, G. , Dai, L. , Gao, G.F. , Griffin, B. , He, J. , Kobinger, G. , Li, J. , Li, J. , Li, S. , Liang, M. , Liao, Y. , Liu, J. , Liu, S. , Liu, X. , Ma, T. , Peng, R. , Qi, J. , Qiu, X. , Shi, Y. , Song, J. , Tong, Z. , Wang, P. , Wang, Q. , Wong, G. , Xiong, Y. , Xu, X. , Yan, J. , Yang, H. , Yang, J. , Yuan, H.
Primary Citation of Related Structures: 5GZO
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Genome polyprotein | A | 409 | Homo Sapiens , Zika Virus | IRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIELVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWGNGCGLFGKGSLVTCAKFACSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHETDENRAKVEITPNSPRAEATLGGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWFHDIPLPWHAGADTGTPHWNNKEALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAEMDGAKGRLSSGHLKCRLKMDKLRLKGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAGTDGPCKVPAQMAVDMQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVGEKKITHHWHRSGSTIGK |
| Genome polyprotein | B | 409 | Homo Sapiens , Zika Virus | IRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIELVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWGNGCGLFGKGSLVTCAKFACSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHETDENRAKVEITPNSPRAEATLGGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWFHDIPLPWHAGADTGTPHWNNKEALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAEMDGAKGRLSSGHLKCRLKMDKLRLKGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAGTDGPCKVPAQMAVDMQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVGEKKITHHWHRSGSTIGK |
| Antibody heavy chain | H | 220 | Homo Sapiens , Zika Virus | QVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCARDRDDLSPFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK |
| Antibody heavy chain | C | 220 | Homo Sapiens , Zika Virus | QVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCARDRDDLSPFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK |
| Antibody light chain | L | 215 | Homo Sapiens , Zika Virus | DIVMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKRLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQHNSYPRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS |
| Antibody light chain | D | 215 | Homo Sapiens , Zika Virus | DIVMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKRLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQHNSYPRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2016-09-29 Deposition Author(s): Bi, Y. , Cheng, G. , Dai, L. , Gao, G.F. , Griffin, B. , He, J. , Kobinger, G. , Li, J. , Li, J. , Li, S. , Liang, M. , Liao, Y. , Liu, J. , Liu, S. , Liu, X. , Ma, T. , Peng, R. , Qi, J. , Qiu, X. , Shi, Y. , Song, J. , Tong, Z. , Wang, P. , Wang, Q. , Wong, G. , Xiong, Y. , Xu, X. , Yan, J. , Yang, H. , Yang, J. , Yuan, H.