PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

5GKP

Crystal structure of the endog worm homologue cps-6 h148a/f122a in complex with dna

PDB DOI: 10.2210/pdb5gkp/pdb

Classification: HYDROLASE/DNA
Organism(s): Caenorhabditis Elegans , Synthetic Construct

Deposited: 2016-07-05
Deposition Author(s): Lin, J.L. , Yuan, H.S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.3 Å

5gkp
Literature

Crystal structure of the endog worm homologue cps-6 h148a/f122a in complex with dna

Lin, J.L. , Yuan, H.S.

Primary Citation of Related Structures: 5GKP


Proteins
Molecule Chains Sequence Length Organism Sequence
Endonuclease G, mitochondrial A 252 Caenorhabditis Elegans , Synthetic Construct MHHHHHHGSPSRSAEIMKHGYPGFTNVRTYEDFVLSYDYKTRTAHWVCEHLTPERLKHAEGVDRKLCEAKPDITFPQKFLSQNTDYKCSGFDRGALAAAGNHRKSQLAVDQTFYLSNMSPQVGRGFNRDKWNDLEMHCRRVAKKMINSYIITGPLYLPKLEGDGKKYIKYQVIGDNNVAVPTHFFKVALFEVTPGKFELESYILPNAVIEDTVEISKFHVPLDAVERSAGLEIFARLDPKSIVKENGAKKGG
Endonuclease G, mitochondrial B 252 Caenorhabditis Elegans , Synthetic Construct MHHHHHHGSPSRSAEIMKHGYPGFTNVRTYEDFVLSYDYKTRTAHWVCEHLTPERLKHAEGVDRKLCEAKPDITFPQKFLSQNTDYKCSGFDRGALAAAGNHRKSQLAVDQTFYLSNMSPQVGRGFNRDKWNDLEMHCRRVAKKMINSYIITGPLYLPKLEGDGKKYIKYQVIGDNNVAVPTHFFKVALFEVTPGKFELESYILPNAVIEDTVEISKFHVPLDAVERSAGLEIFARLDPKSIVKENGAKKGG

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*TP*TP*TP*TP*T)-3') c 8 NA TTTTTTGT
DNA (5'-D(*TP*TP*TP*TP*T)-3') d 8 NA TTTTTTGT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-07-05
Deposition Author(s): Lin, J.L. , Yuan, H.S.