5GKA
Cryo-em structure of human aichi virus
PDB DOI: 10.2210/pdb5gka/pdb
Classification: VIRUS Organism(s): Aichi Virus (Strain Human/A846/88/1989)
Deposited: 2016-07-04 Deposition Author(s): Fry, E.E. , Rao, Z.H. , Ren, J.S. , Stuart, D.I. , Tuthill, T.J. , Wang, X.X. , Zhu, L.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.7 Å
Cryo-em structure of human aichi virus
Fry, E.E. , Rao, Z.H. , Ren, J.S. , Stuart, D.I. , Tuthill, T.J. , Wang, X.X. , Zhu, L.
Primary Citation of Related Structures: 5GKA
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| capsid protein VP1 | A | 253 | Aichi Virus (Strain Human/A846/88/1989) | TLTEDLDAPQDTGNIENGAADNSPQPRTTFDYTGNPLPPDTKLENFFSFYRLLPMGGSGAPSLSFPADEGTIIPLDPINWLKGADVSGIAAMLSCFTYIAADLRITLRFSNPNDNPATMLVAFAPPGATIPLKPTRQMLSNFYMAEVPVSAATSTMVSFSIPYTSPLSAIPTSYFGWEDWSGTNFGQLSSGSWGNLMLIPSLSVDSAIPFDFQLSCWVAFGNFKAWVPRPPPPLPPLPTPAANAERTVAVIKQ |
| capsid protein VP0 | B | 367 | Aichi Virus (Strain Human/A846/88/1989) | TNIYGNGNNVNTDVGANGWAPTVSTGLGDGPVSCTPPTPSPGDTEVPPPRKPFTFPAPPTKSGSRFSKWWEPAAARASESATDSAIEGIDAAGKAASKAITRKLDRPAAPSSTANPQPSLIALNPSATQSGNASILTGSTAPSLLAYPTATPVPLPNPDEPSQPGPSGDRTWLLDTVTWSQEFTRGWNIAGSNGMQWTGLESLIFPVSTDTNWTSTSSPTAYPLPFSFVRAYPDSSWAAMYNTHSMWNCGWRVQVTVNGSQFHAGALILYMVPEATTHAIQTARDNAGFVFPYVILNLYESNTATIEVPYISPTPNTSSGLHAPWTFYLQVLSPLNPPPSLPTSLSCSIYVTPVDSSFHGLRYLAPQ |
| Genome polyprotein | C | 222 | Aichi Virus (Strain Human/A846/88/1989) | HWKTRAVPGAGTFGSAVAGQELPLCGVRAYYPPNAYIPAQVRDWLEFAHRPGLMATVPWTMADEPAERLGIFPVSPSAIAGTGAPISYVISLFSQWRGELAAHLLFTGSAQHYGRLVVCYTPAAPQPPSTMQEAMRGTYTVWDVNAASTLEFTIPFISNSYWKTVDVNNPDALLSTTGYVSIWVQNPLVGPHTAPASALVQAFISAGESFNVRLMQNPALTS |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2016-07-04 Deposition Author(s): Fry, E.E. , Rao, Z.H. , Ren, J.S. , Stuart, D.I. , Tuthill, T.J. , Wang, X.X. , Zhu, L.