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5GIR

Crystal structure of a fab fragment with its ligand peptide

PDB DOI: 10.2210/pdb5gir/pdb

Classification: IMMUNE SYSTEM
Organism(s): Mus Musculus , Synthetic Construct

Deposited: 2016-06-24
Deposition Author(s): Kaneko, K.K. , Kato, Y. , Kitago, Y. , Ogasawara, S. , Takagi, J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.93 Å

5gir
Literature

Crystal structure of a fab fragment with its ligand peptide

Kaneko, K.K. , Kato, Y. , Kitago, Y. , Ogasawara, S. , Takagi, J.

Primary Citation of Related Structures: 5GIR


Proteins
Molecule Chains Sequence Length Organism Sequence
Heavy chain of Fab fragment H 240 Mus Musculus , Synthetic Construct MGWSSIILFLVTTATGVHSQVQLQQPGAELVRPGASVKLSCKASGYTFTSYWMNWVKQRPGQGLECIGMIHPSDGETRLNQKFKDKATLTLDKSSSTAYMQLSSPTSEDSAVYYCTTHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGSPTHKPC
Heavy chain of Fab fragment A 240 Mus Musculus , Synthetic Construct MGWSSIILFLVTTATGVHSQVQLQQPGAELVRPGASVKLSCKASGYTFTSYWMNWVKQRPGQGLECIGMIHPSDGETRLNQKFKDKATLTLDKSSSTAYMQLSSPTSEDSAVYYCTTHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGSPTHKPC
Light chain of Fab fragment L 234 Mus Musculus , Synthetic Construct MVFTPQILGLMLFWISASRGDIVLIQSPATLSVTPGDSVSLSCRASQRISNNLHWYQQKSHESPRLLIRYTSQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQQSNSWPFTFGSGTKLEMKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
Light chain of Fab fragment B 234 Mus Musculus , Synthetic Construct MVFTPQILGLMLFWISASRGDIVLIQSPATLSVTPGDSVSLSCRASQRISNNLHWYQQKSHESPRLLIRYTSQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQQSNSWPFTFGSGTKLEMKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
LYS-PRO-ILE-ILE-ILE-GLY-SER-HIS-ALA-TYR-GLY-ASP C 12 Mus Musculus , Synthetic Construct KPIIIGSHAYGD
LYS-PRO-ILE-ILE-ILE-GLY-SER-HIS-ALA-TYR-GLY-ASP D 12 Mus Musculus , Synthetic Construct KPIIIGSHAYGD
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-06-24
Deposition Author(s): Kaneko, K.K. , Kato, Y. , Kitago, Y. , Ogasawara, S. , Takagi, J.