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5FJ4

Structure of the standard kink turn hmkt-7 as stem loop bound with u1a and l7ae proteins

PDB DOI: 10.2210/pdb5fj4/pdb

Classification: TRANSCRIPTION
Organism(s): Micromonospora Rosaria , Sordaria Macrospora (Strain Atcc Mya-333 / Dsm 997 / K(L3346) / K-Hell) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2015-10-06
Deposition Author(s): Huang, L. , Lilley, D.M.J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.95 Å

5fj4
Literature

Structure of the standard kink turn hmkt-7 as stem loop bound with u1a and l7ae proteins

Huang, L. , Lilley, D.M.J.

Primary Citation of Related Structures: 5FJ4


Proteins
Molecule Chains Sequence Length Organism Sequence
U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A A 102 Micromonospora Rosaria , Sordaria Macrospora (Strain Atcc Mya-333 / Dsm 997 / K(L3346) / K-Hell) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MAVPETRPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTFV
U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A B 102 Micromonospora Rosaria , Sordaria Macrospora (Strain Atcc Mya-333 / Dsm 997 / K(L3346) / K-Hell) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MAVPETRPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTFV
U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A E 102 Micromonospora Rosaria , Sordaria Macrospora (Strain Atcc Mya-333 / Dsm 997 / K(L3346) / K-Hell) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MAVPETRPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTFV
U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A F 102 Micromonospora Rosaria , Sordaria Macrospora (Strain Atcc Mya-333 / Dsm 997 / K(L3346) / K-Hell) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MAVPETRPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTFV
50S RIBOSOMAL PROTEIN L7AE C 123 Micromonospora Rosaria , Sordaria Macrospora (Strain Atcc Mya-333 / Dsm 997 / K(L3346) / K-Hell) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) GPEASYVKFEVPEDMQNEALSLLEKVRESGKVKKGTNETTKAVERGLAKLVYIAEDVDPPEIVAHLPLLCEEKNVPYIYVKSKNDLGRAVGIEVPCASAAIINEGELRKELGSLVEKIKGLQK
50S RIBOSOMAL PROTEIN L7AE G 123 Micromonospora Rosaria , Sordaria Macrospora (Strain Atcc Mya-333 / Dsm 997 / K(L3346) / K-Hell) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) GPEASYVKFEVPEDMQNEALSLLEKVRESGKVKKGTNETTKAVERGLAKLVYIAEDVDPPEIVAHLPLLCEEKNVPYIYVKSKNDLGRAVGIEVPCASAAIINEGELRKELGSLVEKIKGLQK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
HMKT-7 d 35 NA GAGGGAGCGCCAUUGCACUCCGGUGCGAAGAACUC
HMKT-7 h 35 NA GAGGGAGCGCCAUUGCACUCCGGUGCGAAGAACUC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2015-10-06
Deposition Author(s): Huang, L. , Lilley, D.M.J.