PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

5F8Q

Blood group antigen binding adhesin baba of helicobacter pylori strain s831 in complex with nanobody nb-er19

PDB DOI: 10.2210/pdb5f8q/pdb

Classification: CELL ADHESION
Organism(s): Helicobacter Pylori , Lama Glama

Deposited: 2015-12-09
Deposition Author(s): Boren, T. , Gideonsson, P. , Moonens, K. , Muyldermans, S. , Oscarson, S. , Remaut, H. , Romao, E. , Subedi, S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.59 Å

5f8q
Literature

Blood group antigen binding adhesin baba of helicobacter pylori strain s831 in complex with nanobody nb-er19

Boren, T. , Gideonsson, P. , Moonens, K. , Muyldermans, S. , Oscarson, S. , Remaut, H. , Romao, E. , Subedi, S.

Primary Citation of Related Structures: 5F8Q


Proteins
Molecule Chains Sequence Length Organism Sequence
Adhesin binding fucosylated histo-blood group antigen,Adhesin,Adhesin binding fucosylated histo-blood group antigen A 466 Helicobacter Pylori , Lama Glama ASWSHPQFEKSGGGGGLVPRGSGIQDLSDNYENLSKLLTRYSTLNTLIKLSADPSAINAARENLGASAKNLIGDTKNSPAYQAVLLAINAAVGFWNVLGYATQCGGNANGQESTSSTTIFNNEPGYRSTSITCSLNRYKPGYYGPMSIENFKKLNEAYQILQTALNKGLPALKENNGTVSVTYTYTCSGEGNDNCLPKVTGVDNQNGGTKTKTQTIDGKTVTTTISSKVVDSQAKGNTTRVSYTEITNKLDGVPDSAQALLAQASTLINTINTACPYFSVTNKSGGPQMEPTRGKLCGFTEEISAIQKMITDAQELVNQTSVINEHEQSTPVGGNNGKPFNPFTDASFAQGMLANASAQAKMLNLAHQVGQTINPDNLTGTFKNFVTGFLATCNNKSTAGTSGTQGSPPGTVTTQTFASGCAYVEQTITNLNNSIAHFGTQEQQIQQAENIADTLVNFGSHHHHHH
Adhesin binding fucosylated histo-blood group antigen,Adhesin,Adhesin binding fucosylated histo-blood group antigen B 466 Helicobacter Pylori , Lama Glama ASWSHPQFEKSGGGGGLVPRGSGIQDLSDNYENLSKLLTRYSTLNTLIKLSADPSAINAARENLGASAKNLIGDTKNSPAYQAVLLAINAAVGFWNVLGYATQCGGNANGQESTSSTTIFNNEPGYRSTSITCSLNRYKPGYYGPMSIENFKKLNEAYQILQTALNKGLPALKENNGTVSVTYTYTCSGEGNDNCLPKVTGVDNQNGGTKTKTQTIDGKTVTTTISSKVVDSQAKGNTTRVSYTEITNKLDGVPDSAQALLAQASTLINTINTACPYFSVTNKSGGPQMEPTRGKLCGFTEEISAIQKMITDAQELVNQTSVINEHEQSTPVGGNNGKPFNPFTDASFAQGMLANASAQAKMLNLAHQVGQTINPDNLTGTFKNFVTGFLATCNNKSTAGTSGTQGSPPGTVTTQTFASGCAYVEQTITNLNNSIAHFGTQEQQIQQAENIADTLVNFGSHHHHHH
Nanobody Nb-ER19 C 120 Helicobacter Pylori , Lama Glama QVQLQESGGGLVQPGGSLRLSCAASGSIFSGNVMGWYRQAPGKLREWVAAITPQGVPNYADSVKGRFTISRDNAKNMLYLQMSSLKPEDTALYYCNRLPNYRSWGQGTQVTVSSHHHHHH
Nanobody Nb-ER19 D 120 Helicobacter Pylori , Lama Glama QVQLQESGGGLVQPGGSLRLSCAASGSIFSGNVMGWYRQAPGKLREWVAAITPQGVPNYADSVKGRFTISRDNAKNMLYLQMSSLKPEDTALYYCNRLPNYRSWGQGTQVTVSSHHHHHH
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2015-12-09
Deposition Author(s): Boren, T. , Gideonsson, P. , Moonens, K. , Muyldermans, S. , Oscarson, S. , Remaut, H. , Romao, E. , Subedi, S.