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FASTA Sequence PDB Format mmCIF Format
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5ESV

Crystal structure of broadly neutralizing antibody ch03, isolated from donor ch0219, in complex with scaffolded trimeric hiv-1 env v1v2 domain from the clade c superinfecting strain of donor cap256.

PDB DOI: 10.2210/pdb5esv/pdb

Classification: IMMUNE SYSTEM
Organism(s): Haemophilus Influenzae , Haemophilus Influenzae (Strain Atcc 51907 / Dsm 11121 / Kw20 / Rd) , Homo Sapiens , Human Immunodeficiency Virus 1

Deposited: 2015-11-17
Deposition Author(s): Gorman, J. , Kwong, P.D. , Yang, M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.105 Å

5esv
Literature

Crystal structure of broadly neutralizing antibody ch03, isolated from donor ch0219, in complex with scaffolded trimeric hiv-1 env v1v2 domain from the clade c superinfecting strain of donor cap256.

Gorman, J. , Kwong, P.D. , Yang, M.

Primary Citation of Related Structures: 5ESV


Proteins
Molecule Chains Sequence Length Organism Sequence
CH03 Heavy Chain A 244 Haemophilus Influenzae , Haemophilus Influenzae (Strain Atcc 51907 / Dsm 11121 / Kw20 / Rd) , Homo Sapiens , Human Immunodeficiency Virus 1 EVQLVESGGGVVRPGGSLRLSCAASGFIFENYGLTWVRQVPGKGLHWVSGMNWNGGDTRYADSVRGRFSMSRDNSNNIAYLQMKNLRVDDTALYYCARGTDYTIDDQGIFYKGSGTFWYFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKGLEVLF
CH03 Heavy Chain C 244 Haemophilus Influenzae , Haemophilus Influenzae (Strain Atcc 51907 / Dsm 11121 / Kw20 / Rd) , Homo Sapiens , Human Immunodeficiency Virus 1 EVQLVESGGGVVRPGGSLRLSCAASGFIFENYGLTWVRQVPGKGLHWVSGMNWNGGDTRYADSVRGRFSMSRDNSNNIAYLQMKNLRVDDTALYYCARGTDYTIDDQGIFYKGSGTFWYFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKGLEVLF
CH03 Heavy Chain H 244 Haemophilus Influenzae , Haemophilus Influenzae (Strain Atcc 51907 / Dsm 11121 / Kw20 / Rd) , Homo Sapiens , Human Immunodeficiency Virus 1 EVQLVESGGGVVRPGGSLRLSCAASGFIFENYGLTWVRQVPGKGLHWVSGMNWNGGDTRYADSVRGRFSMSRDNSNNIAYLQMKNLRVDDTALYYCARGTDYTIDDQGIFYKGSGTFWYFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKGLEVLF
CH03 Light Chain B 215 Haemophilus Influenzae , Haemophilus Influenzae (Strain Atcc 51907 / Dsm 11121 / Kw20 / Rd) , Homo Sapiens , Human Immunodeficiency Virus 1 EIVLTQSPATLSLSPGERATLSCRASQSVHPKYFAWYQQKPGQSPRLLIYSGSTRAAGIADRFSGGGSGIHFTLTITRVEPEDFAVYFCQQYGGSPYTFGQGTKVELRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
CH03 Light Chain D 215 Haemophilus Influenzae , Haemophilus Influenzae (Strain Atcc 51907 / Dsm 11121 / Kw20 / Rd) , Homo Sapiens , Human Immunodeficiency Virus 1 EIVLTQSPATLSLSPGERATLSCRASQSVHPKYFAWYQQKPGQSPRLLIYSGSTRAAGIADRFSGGGSGIHFTLTITRVEPEDFAVYFCQQYGGSPYTFGQGTKVELRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
CH03 Light Chain L 215 Haemophilus Influenzae , Haemophilus Influenzae (Strain Atcc 51907 / Dsm 11121 / Kw20 / Rd) , Homo Sapiens , Human Immunodeficiency Virus 1 EIVLTQSPATLSLSPGERATLSCRASQSVHPKYFAWYQQKPGQSPRLLIYSGSTRAAGIADRFSGGGSGIHFTLTITRVEPEDFAVYFCQQYGGSPYTFGQGTKVELRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase,Envelope glycoprotein gp160 E 211 Haemophilus Influenzae , Haemophilus Influenzae (Strain Atcc 51907 / Dsm 11121 / Kw20 / Rd) , Homo Sapiens , Human Immunodeficiency Virus 1 SLIRIGHGFDVHAFGCVTLNCSDAKVNINATYNGTREEIKNCSFNATTELRDKKKKEYALFYRLDIVPLNKEGNNNSEYRLINCNGGSGGDVALHALTDAILGAAALGDIGKLFPKNADSRGLLREAFRQVQEKGYKIGNVDITIIAQAPKMRPHIDAMRAKIAEDLQCDIEQVNVKATTTEKLGFTGRQEGIACEAVALLIRQGLEVLFQ
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase,Envelope glycoprotein gp160 F 211 Haemophilus Influenzae , Haemophilus Influenzae (Strain Atcc 51907 / Dsm 11121 / Kw20 / Rd) , Homo Sapiens , Human Immunodeficiency Virus 1 SLIRIGHGFDVHAFGCVTLNCSDAKVNINATYNGTREEIKNCSFNATTELRDKKKKEYALFYRLDIVPLNKEGNNNSEYRLINCNGGSGGDVALHALTDAILGAAALGDIGKLFPKNADSRGLLREAFRQVQEKGYKIGNVDITIIAQAPKMRPHIDAMRAKIAEDLQCDIEQVNVKATTTEKLGFTGRQEGIACEAVALLIRQGLEVLFQ
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase,Envelope glycoprotein gp160 G 211 Haemophilus Influenzae , Haemophilus Influenzae (Strain Atcc 51907 / Dsm 11121 / Kw20 / Rd) , Homo Sapiens , Human Immunodeficiency Virus 1 SLIRIGHGFDVHAFGCVTLNCSDAKVNINATYNGTREEIKNCSFNATTELRDKKKKEYALFYRLDIVPLNKEGNNNSEYRLINCNGGSGGDVALHALTDAILGAAALGDIGKLFPKNADSRGLLREAFRQVQEKGYKIGNVDITIIAQAPKMRPHIDAMRAKIAEDLQCDIEQVNVKATTTEKLGFTGRQEGIACEAVALLIRQGLEVLFQ
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2015-11-17
Deposition Author(s): Gorman, J. , Kwong, P.D. , Yang, M.