5EI9
Human prdm9 allele-a znf domain with associated recombination hotspot dna sequence i
PDB DOI: 10.2210/pdb5ei9/pdb
Classification: TRANSCRIPTION/DNA Organism(s): Homo Sapiens , Synthetic Construct
Deposited: 2015-10-29 Deposition Author(s): Cheng, X. , Horton, J.R. , Patel, A. , Wilson, G.G. , Zhang, X.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 1.921 Å
Human prdm9 allele-a znf domain with associated recombination hotspot dna sequence i
Cheng, X. , Horton, J.R. , Patel, A. , Wilson, G.G. , Zhang, X.
Primary Citation of Related Structures: 5EI9
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(*AP*TP*CP*CP*AP*CP*GP*TP*GP*GP*CP*TP*AP*GP*GP*GP*AP*GP*GP*CP*C)-3') | a | 21 | NA | ATCCACGTGGCTAGGGAGGCC |
| DNA (5'-D(*AP*TP*CP*CP*AP*CP*GP*TP*GP*GP*CP*TP*AP*GP*GP*GP*AP*GP*GP*CP*C)-3') | c | 21 | NA | ATCCACGTGGCTAGGGAGGCC |
| DNA (5'-D(*TP*GP*GP*CP*CP*TP*CP*CP*CP*TP*AP*GP*CP*CP*AP*CP*GP*TP*GP*GP*A)-3') | b | 21 | NA | TGGCCTCCCTAGCCACGTGGA |
| DNA (5'-D(*TP*GP*GP*CP*CP*TP*CP*CP*CP*TP*AP*GP*CP*CP*AP*CP*GP*TP*GP*GP*A)-3') | d | 21 | NA | TGGCCTCCCTAGCCACGTGGA |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Histone-lysine N-methyltransferase PRDM9 | F | 144 | Homo Sapiens , Synthetic Construct | GSEKPYVCRECGRGFSNKSHLLRHQRTHTGEKPYVCRECGRGFRDKSHLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFSNKSHLLRHQRTHTGEKPYVCRECGRGFRNKSHLLRHQRTHTGEK |
| Histone-lysine N-methyltransferase PRDM9 | E | 144 | Homo Sapiens , Synthetic Construct | GSEKPYVCRECGRGFSNKSHLLRHQRTHTGEKPYVCRECGRGFRDKSHLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFSNKSHLLRHQRTHTGEKPYVCRECGRGFRNKSHLLRHQRTHTGEK |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2015-10-29 Deposition Author(s): Cheng, X. , Horton, J.R. , Patel, A. , Wilson, G.G. , Zhang, X.