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5E8N
The structure of the teipp associated trh4 peptide in complex with h-2d(b)
PDB DOI: 10.2210/pdb5e8n/pdb
Classification: IMMUNE SYSTEM Organism(s): Mus Musculus , Synthetic Construct
Deposited: 2015-10-14 Deposition Author(s): Achour, A. , Buratto, J. , Doorduijn, E. , Duru, A.D. , Hafstrand, I. , Oliveira, C.C. , Sandalova, T. , Van Hall, T.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.25 Å
The structure of the teipp associated trh4 peptide in complex with h-2d(b)
Achour, A. , Buratto, J. , Doorduijn, E. , Duru, A.D. , Hafstrand, I. , Oliveira, C.C. , Sandalova, T. , Van Hall, T.
Primary Citation of Related Structures: 5E8N
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| H-2 class I histocompatibility antigen, D-B alpha chain | A | 276 | Mus Musculus , Synthetic Construct | GPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPWMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSGCDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQSGAAEHYKAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVTLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVPLGKEQNYTCRVYHEGLPEPLTLRWEP |
| H-2 class I histocompatibility antigen, D-B alpha chain | D | 276 | Mus Musculus , Synthetic Construct | GPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPWMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSGCDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQSGAAEHYKAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVTLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVPLGKEQNYTCRVYHEGLPEPLTLRWEP |
| H-2 class I histocompatibility antigen, D-B alpha chain | G | 276 | Mus Musculus , Synthetic Construct | GPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPWMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSGCDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQSGAAEHYKAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVTLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVPLGKEQNYTCRVYHEGLPEPLTLRWEP |
| H-2 class I histocompatibility antigen, D-B alpha chain | J | 276 | Mus Musculus , Synthetic Construct | GPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPWMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSGCDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQSGAAEHYKAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVTLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVPLGKEQNYTCRVYHEGLPEPLTLRWEP |
| Beta-2-microglobulin | B | 99 | Mus Musculus , Synthetic Construct | IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYACRVKHDSMAEPKTVYWDRDM |
| Beta-2-microglobulin | E | 99 | Mus Musculus , Synthetic Construct | IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYACRVKHDSMAEPKTVYWDRDM |
| Beta-2-microglobulin | H | 99 | Mus Musculus , Synthetic Construct | IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYACRVKHDSMAEPKTVYWDRDM |
| Beta-2-microglobulin | K | 99 | Mus Musculus , Synthetic Construct | IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYACRVKHDSMAEPKTVYWDRDM |
| Ceramide synthase 5 | C | 9 | Mus Musculus , Synthetic Construct | MCLRMTAVM |
| Ceramide synthase 5 | F | 9 | Mus Musculus , Synthetic Construct | MCLRMTAVM |
| Ceramide synthase 5 | I | 9 | Mus Musculus , Synthetic Construct | MCLRMTAVM |
| Ceramide synthase 5 | L | 9 | Mus Musculus , Synthetic Construct | MCLRMTAVM |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2015-10-14 Deposition Author(s): Achour, A. , Buratto, J. , Doorduijn, E. , Duru, A.D. , Hafstrand, I. , Oliveira, C.C. , Sandalova, T. , Van Hall, T.