Advanced Search:
5E08
Specific recognition of a single-stranded rna sequence by an engineered synthetic antibody fragment
PDB DOI: 10.2210/pdb5e08/pdb
Classification: Immune system/RNA Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2015-09-28 Deposition Author(s): Huang, H. , Koide, S. , Kossiakoff, A.A. , Li, N. , Piccirilli, J.A. , Qin, D. , Shao, Y. , Staley, J.P.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.38 Å
Specific recognition of a single-stranded rna sequence by an engineered synthetic antibody fragment
Huang, H. , Koide, S. , Kossiakoff, A.A. , Li, N. , Piccirilli, J.A. , Qin, D. , Shao, Y. , Staley, J.P.
Primary Citation of Related Structures: 5E08
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Fab Heavy Chain | H | 233 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | EVQLVESGGGLVQPGGSLRLSCAASGFSISSSYIHWVRQAPGKGLEWVAYIYPYYGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYYSSGGSYYRYSRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH |
| Fab Light Chain | L | 215 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSYPYTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| RNA | n | 12 | NA | GUAUGCAUAGGC |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2015-09-28 Deposition Author(s): Huang, H. , Koide, S. , Kossiakoff, A.A. , Li, N. , Piccirilli, J.A. , Qin, D. , Shao, Y. , Staley, J.P.