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5DNY

Structure of the atprs-mre11/rad50-dna complex

PDB DOI: 10.2210/pdb5dny/pdb

Classification: RECOMBINATION/DNA
Organism(s): Methanocaldococcus Jannaschii (Strain Atcc 43067 / Dsm 2661 / Jal-1 / Jcm 10045 / Nbrc 100440) , Synthetic Construct

Deposited: 2015-09-10
Deposition Author(s): Liu, Y.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.11 Å

5dny
Literature

Structure of the atprs-mre11/rad50-dna complex

Liu, Y.

Primary Citation of Related Structures: 5DNY


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA double-strand break repair protein Mre11 A 386 Methanocaldococcus Jannaschii (Strain Atcc 43067 / Dsm 2661 / Jal-1 / Jcm 10045 / Nbrc 100440) , Synthetic Construct MGSSHHHHHHSSGLVPRGSHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHENNIKVYIVAGNHEMPRRLGEESPLALLKDYVKILDGKDVINVNGEEIFICGTYYHKKSKREEMLDKLKNFESEAKNYKKKILMLHQGINPYIPLDYELEHFDLPKFSYYALGHIHKRILERFNDGILAYSGSTEIIYRNEYEDYKKEGKGFYLVDFSGNDLDISDIEKIDIECREFVEVNIKDKKSFNEAVNKIERCKNKPVVFGKIKREFKPWFDTLKDKILINKAIIVDDEFIDMPDNVDIESLNIKELLVDYANRQGIDGDLVLSLYKALLNNENWKELLDEYYNTKFRG
DNA double-strand break repair protein Mre11 C 386 Methanocaldococcus Jannaschii (Strain Atcc 43067 / Dsm 2661 / Jal-1 / Jcm 10045 / Nbrc 100440) , Synthetic Construct MGSSHHHHHHSSGLVPRGSHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHENNIKVYIVAGNHEMPRRLGEESPLALLKDYVKILDGKDVINVNGEEIFICGTYYHKKSKREEMLDKLKNFESEAKNYKKKILMLHQGINPYIPLDYELEHFDLPKFSYYALGHIHKRILERFNDGILAYSGSTEIIYRNEYEDYKKEGKGFYLVDFSGNDLDISDIEKIDIECREFVEVNIKDKKSFNEAVNKIERCKNKPVVFGKIKREFKPWFDTLKDKILINKAIIVDDEFIDMPDNVDIESLNIKELLVDYANRQGIDGDLVLSLYKALLNNENWKELLDEYYNTKFRG
DNA double-strand break repair Rad50 ATPase,DNA double-strand break repair Rad50 ATPase B 371 Methanocaldococcus Jannaschii (Strain Atcc 43067 / Dsm 2661 / Jal-1 / Jcm 10045 / Nbrc 100440) , Synthetic Construct MSMILKEIRMNNFKSHVNSRIKFEKGIVAIIGENGSGKSSIFEAVFFALFGAGSNFNYDTIITKGKKSVYVELDFEVNGNNYKIIREYDSGRGGAKLYKNGKPYATTISAVNKAVNEILGVDRNMFLNSIYIKQGEIAKFLSLKPSEKLETVAKLLGIDEFEKCYQKMGEIVKEYEKRLERIEGELNYKEESLKARLKEMSNLEKEKEKLTKFVEYLDKVRRIFGRNGFQAYLREKYVPLIQKYLNEAFSEFDLPYSFVELTKDFEVRVHAPNGVLTIDNLSGGEQIAVALSLRLAIANALIGNRVECIILDEPTVYLDENRRAKLAEIFRKVKSIPQMIIITHHRELEDVADVIINVKKDGNVSKVKING
DNA double-strand break repair Rad50 ATPase,DNA double-strand break repair Rad50 ATPase D 371 Methanocaldococcus Jannaschii (Strain Atcc 43067 / Dsm 2661 / Jal-1 / Jcm 10045 / Nbrc 100440) , Synthetic Construct MSMILKEIRMNNFKSHVNSRIKFEKGIVAIIGENGSGKSSIFEAVFFALFGAGSNFNYDTIITKGKKSVYVELDFEVNGNNYKIIREYDSGRGGAKLYKNGKPYATTISAVNKAVNEILGVDRNMFLNSIYIKQGEIAKFLSLKPSEKLETVAKLLGIDEFEKCYQKMGEIVKEYEKRLERIEGELNYKEESLKARLKEMSNLEKEKEKLTKFVEYLDKVRRIFGRNGFQAYLREKYVPLIQKYLNEAFSEFDLPYSFVELTKDFEVRVHAPNGVLTIDNLSGGEQIAVALSLRLAIANALIGNRVECIILDEPTVYLDENRRAKLAEIFRKVKSIPQMIIITHHRELEDVADVIINVKKDGNVSKVKING

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (27-MER) e 27 NA AAAGTTGGGATTGAGACACACATTCGT
DNA (27-MER) f 27 NA TTACGAATGTGTGTCTCAATCCCAACT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2015-09-10
Deposition Author(s): Liu, Y.