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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

5DN6

Atp synthase from paracoccus denitrificans

PDB DOI: 10.2210/pdb5dn6/pdb

Classification: HYDROLASE
Organism(s): Paracoccus Denitrificans

Deposited: 2015-09-09
Deposition Author(s): Leslie, A.G.W. , Montgomery, M.G. , Morales-Rios, E. , Walker, J.E.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.98 Å

Literature

Atp synthase from paracoccus denitrificans

Leslie, A.G.W. , Montgomery, M.G. , Morales-Rios, E. , Walker, J.E.

Primary Citation of Related Structures: 5DN6


Proteins
Molecule Chains Sequence Length Organism Sequence
Chain A 1 20 Paracoccus Denitrificans XXXXXXXXXXXXXXXXXXXX
Chain V V 78 Paracoccus Denitrificans XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Chain W W 124 Paracoccus Denitrificans XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
ATP synthase subunit a,ATP synthase subunit a,ATP synthase subunit a,ATP synthase subunit a X 283 Paracoccus Denitrificans XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAEEEAGGLVFHPMDQFVIKPLFGEGPVNWYTPTNATLWMALAALAITALLVFGTRGRAIVPNRVQSIAELLYGMVHKMVEDVTGKDGLKYFPYVMTLFCFILFANFLGLLPKSFSPTSHIAVTAVLAVLVFAGVTVLGFVKNGAHFLGLFWVSSAPLALRPVLAVIELISYFVRPVSHSIRLAGNIMAGHAVIKVFAAFAAVAAIAPVSVVAITAMYGLEVLVCLIQAYVFTILTCVYLKDALHPAH
Chain Y Y 54 Paracoccus Denitrificans XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Zeta inhibitor protein Z 104 Paracoccus Denitrificans MTTFDDRERAHEAKFAHDAELNFKAEARRNRLLGEWAAGLLGKTGDDARAYALTVVTSDFDEPGDEDVFRKLAADLEGKADEETIRAKMVELRATAREQIISEI
Chain B 2 15 Paracoccus Denitrificans XXXXXXXXXXXXXXX
Chain C 3 19 Paracoccus Denitrificans XXXXXXXXXXXXXXXXXXX
ATP synthase subunit alpha A 511 Paracoccus Denitrificans MGIQAAEISAILKDQIKNFGQDAEVAEVGQVLSVGDGIARVYGLDKVQAGEMVEFPGGIRGMVLNLETDNVGVVIFGDDRDIKEGDTVKRTGAIVEVPAGKELLGRVVDALGNPIDGKGPLNASERRIADVKAPGIMPRKSVHEPMATGLKSVDAMIPVGRGQRELIIGDRQTGKTAIALDTILNQANYNGREADGMKTLHCIYVAVGQKRSTVAQLVKKLEETGAMAYTTVVAATASDPAPMQYLAPYSATAMGEYFRDNGMDALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKLNEANGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFFQGIRPAVNTGLSVSRVGSAAQTKAMKSVAGPVKLELAQYREMAAFAQFGSDLDAATQKLLNRGARLTELMKQPQYSPLTNAEIVIVIYAGTKGYLDGIPVRDVTKWEHGLLQYLRNQKADLLEDMTKNDRKVAGELEDAIKAALDGYAKTYA
ATP synthase subunit alpha B 511 Paracoccus Denitrificans MGIQAAEISAILKDQIKNFGQDAEVAEVGQVLSVGDGIARVYGLDKVQAGEMVEFPGGIRGMVLNLETDNVGVVIFGDDRDIKEGDTVKRTGAIVEVPAGKELLGRVVDALGNPIDGKGPLNASERRIADVKAPGIMPRKSVHEPMATGLKSVDAMIPVGRGQRELIIGDRQTGKTAIALDTILNQANYNGREADGMKTLHCIYVAVGQKRSTVAQLVKKLEETGAMAYTTVVAATASDPAPMQYLAPYSATAMGEYFRDNGMDALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKLNEANGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFFQGIRPAVNTGLSVSRVGSAAQTKAMKSVAGPVKLELAQYREMAAFAQFGSDLDAATQKLLNRGARLTELMKQPQYSPLTNAEIVIVIYAGTKGYLDGIPVRDVTKWEHGLLQYLRNQKADLLEDMTKNDRKVAGELEDAIKAALDGYAKTYA
ATP synthase subunit alpha C 511 Paracoccus Denitrificans MGIQAAEISAILKDQIKNFGQDAEVAEVGQVLSVGDGIARVYGLDKVQAGEMVEFPGGIRGMVLNLETDNVGVVIFGDDRDIKEGDTVKRTGAIVEVPAGKELLGRVVDALGNPIDGKGPLNASERRIADVKAPGIMPRKSVHEPMATGLKSVDAMIPVGRGQRELIIGDRQTGKTAIALDTILNQANYNGREADGMKTLHCIYVAVGQKRSTVAQLVKKLEETGAMAYTTVVAATASDPAPMQYLAPYSATAMGEYFRDNGMDALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKLNEANGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFFQGIRPAVNTGLSVSRVGSAAQTKAMKSVAGPVKLELAQYREMAAFAQFGSDLDAATQKLLNRGARLTELMKQPQYSPLTNAEIVIVIYAGTKGYLDGIPVRDVTKWEHGLLQYLRNQKADLLEDMTKNDRKVAGELEDAIKAALDGYAKTYA
ATP synthase subunit beta D 474 Paracoccus Denitrificans MAEANGKITQVIGAVVDVQFDGQLPAILNALETENNGKRLVLEVAQHLGENTVRTIAMDATEGLVRGLPVKDTGGPIMVPVGDATLGRILNVVGEPVDEGGPVEATQTRAIHQQAPDFAAQATASEILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFAGVGERTREGNDLYHEMVESGVIKPDDLSKSQVALVYGQMNEPPGARMRVALTGLTVAEQFRDATGTDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERITSTKNGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRAISELGIYPAVDPLDSNSRILDPAVVGEEHYQVARDVQGILQKYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFDVAKVFTGSDGVQVPLEDTIKSFKAVVAGEYDHLPEAAFYMVGGIEDVKAKAQRLAADAA
ATP synthase subunit beta E 474 Paracoccus Denitrificans MAEANGKITQVIGAVVDVQFDGQLPAILNALETENNGKRLVLEVAQHLGENTVRTIAMDATEGLVRGLPVKDTGGPIMVPVGDATLGRILNVVGEPVDEGGPVEATQTRAIHQQAPDFAAQATASEILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFAGVGERTREGNDLYHEMVESGVIKPDDLSKSQVALVYGQMNEPPGARMRVALTGLTVAEQFRDATGTDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERITSTKNGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRAISELGIYPAVDPLDSNSRILDPAVVGEEHYQVARDVQGILQKYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFDVAKVFTGSDGVQVPLEDTIKSFKAVVAGEYDHLPEAAFYMVGGIEDVKAKAQRLAADAA
ATP synthase subunit beta F 474 Paracoccus Denitrificans MAEANGKITQVIGAVVDVQFDGQLPAILNALETENNGKRLVLEVAQHLGENTVRTIAMDATEGLVRGLPVKDTGGPIMVPVGDATLGRILNVVGEPVDEGGPVEATQTRAIHQQAPDFAAQATASEILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFAGVGERTREGNDLYHEMVESGVIKPDDLSKSQVALVYGQMNEPPGARMRVALTGLTVAEQFRDATGTDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERITSTKNGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRAISELGIYPAVDPLDSNSRILDPAVVGEEHYQVARDVQGILQKYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFDVAKVFTGSDGVQVPLEDTIKSFKAVVAGEYDHLPEAAFYMVGGIEDVKAKAQRLAADAA
ATP synthase gamma chain G 290 Paracoccus Denitrificans MPSLKDLKNRIGSVKNTRKITKAMQMVAAAKLRRAQEAAEAARPYADRMAAVMAGLTAAAAGSDMAPRLLAGTGEDRRHLLVVMTSERGLAGGFNSSIVKLARLRLQELQAQGKQVSILTVGKKGREQLKREYGDLFVNHVDLSEVKRIGYDNARAIADEILDRFDNGEFDVATLFYNRFESVISQVPTARQVIPAVIEEGEAGASSLYDYEPDENAILNDLLPRSVATQVFAALLENAASEQGARMTAMDNATRNAGDMIDRLTTVYNRSRQAAITKELIEIISGAEAL
ATP synthase subunit delta H 188 Paracoccus Denitrificans MTVANSASISADIAGRYAQALFDLVRDSGGIDALSSQIDDLASAYDASQDLRDLTLSPLYDRQQQEAAVGALSERMGLSAELANTLRLLARNRRLFTLPQFVAKLRNLIADAKGEVTADVVSAQALTDEQKARLADTLAAKSGKTVKLNARVDESLIGGMIVKLGSQMIDSSIRSKLASLQNAMKEVG
ATP synthase epsilon chain I 148 Paracoccus Denitrificans MADTMQFDLVSPERNLVSVPVREVRLPGADGDLTAMPGHAPAIVNLRPGLVTVVAGDGSETEFAVTGGFAEINNESVTLLAERGHPRAEMTQEVFNEMMAQARRRVEAAKERESAGEELVAAAVKLLADMEALGTHIGLDPNHANFPH
ATP synthase F0 subcomplex C subunit J 77 Paracoccus Denitrificans MENLGQLGQYLGAGLACVGMAGAAMGVGNVAGNYLAGALRNPSAAASQTATLFIGMAFAEALGIFSFLVALLLLFAV
ATP synthase F0 subcomplex C subunit K 77 Paracoccus Denitrificans MENLGQLGQYLGAGLACVGMAGAAMGVGNVAGNYLAGALRNPSAAASQTATLFIGMAFAEALGIFSFLVALLLLFAV
ATP synthase F0 subcomplex C subunit L 77 Paracoccus Denitrificans MENLGQLGQYLGAGLACVGMAGAAMGVGNVAGNYLAGALRNPSAAASQTATLFIGMAFAEALGIFSFLVALLLLFAV
ATP synthase F0 subcomplex C subunit M 77 Paracoccus Denitrificans MENLGQLGQYLGAGLACVGMAGAAMGVGNVAGNYLAGALRNPSAAASQTATLFIGMAFAEALGIFSFLVALLLLFAV
ATP synthase F0 subcomplex C subunit N 77 Paracoccus Denitrificans MENLGQLGQYLGAGLACVGMAGAAMGVGNVAGNYLAGALRNPSAAASQTATLFIGMAFAEALGIFSFLVALLLLFAV
ATP synthase F0 subcomplex C subunit O 77 Paracoccus Denitrificans MENLGQLGQYLGAGLACVGMAGAAMGVGNVAGNYLAGALRNPSAAASQTATLFIGMAFAEALGIFSFLVALLLLFAV
ATP synthase F0 subcomplex C subunit P 77 Paracoccus Denitrificans MENLGQLGQYLGAGLACVGMAGAAMGVGNVAGNYLAGALRNPSAAASQTATLFIGMAFAEALGIFSFLVALLLLFAV
ATP synthase F0 subcomplex C subunit Q 77 Paracoccus Denitrificans MENLGQLGQYLGAGLACVGMAGAAMGVGNVAGNYLAGALRNPSAAASQTATLFIGMAFAEALGIFSFLVALLLLFAV
ATP synthase F0 subcomplex C subunit R 77 Paracoccus Denitrificans MENLGQLGQYLGAGLACVGMAGAAMGVGNVAGNYLAGALRNPSAAASQTATLFIGMAFAEALGIFSFLVALLLLFAV
ATP synthase F0 subcomplex C subunit S 77 Paracoccus Denitrificans MENLGQLGQYLGAGLACVGMAGAAMGVGNVAGNYLAGALRNPSAAASQTATLFIGMAFAEALGIFSFLVALLLLFAV
ATP synthase F0 subcomplex C subunit T 77 Paracoccus Denitrificans MENLGQLGQYLGAGLACVGMAGAAMGVGNVAGNYLAGALRNPSAAASQTATLFIGMAFAEALGIFSFLVALLLLFAV
ATP synthase F0 subcomplex C subunit U 77 Paracoccus Denitrificans MENLGQLGQYLGAGLACVGMAGAAMGVGNVAGNYLAGALRNPSAAASQTATLFIGMAFAEALGIFSFLVALLLLFAV
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2015-09-09
Deposition Author(s): Leslie, A.G.W. , Montgomery, M.G. , Morales-Rios, E. , Walker, J.E.