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FASTA Sequence PDB Format mmCIF Format
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5DG0

Human ape1 phosphorothioate substrate complex with mn2+

PDB DOI: 10.2210/pdb5dg0/pdb

Classification: HYDROLASE,LYASE/DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2015-08-27
Deposition Author(s): Freudenthal, B.D. , Wilson, S.H.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.8 Å

5dg0
Literature

Human ape1 phosphorothioate substrate complex with mn2+

Freudenthal, B.D. , Wilson, S.H.

Primary Citation of Related Structures: 5DG0


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA-(apurinic or apyrimidinic site) lyase A 276 Homo Sapiens , Synthetic Construct ALYEDPPDQKTSPSGKPATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYWSAPSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLAL
DNA-(apurinic or apyrimidinic site) lyase B 276 Homo Sapiens , Synthetic Construct ALYEDPPDQKTSPSGKPATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYWSAPSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLAL

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(OMC)P*(48Z)P*CP*GP*AP*CP*GP*GP*AP*TP*CP*C)-3') p 21 NA GCTGATGCGCXCGACGGATCC
DNA (5'-D(*GP*GP*AP*TP*CP*CP*GP*TP*CP*GP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3') v 21 NA GGATCCGTCGGGCGCATCAGC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2015-08-27
Deposition Author(s): Freudenthal, B.D. , Wilson, S.H.