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5DB7

Structure of human dna polymerase beta host-guest complex with the n7mg base paired with a dt

PDB DOI: 10.2210/pdb5db7/pdb

Classification: transferase/dna
Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2015-08-21
Deposition Author(s): Koag, M.C. , Lee, S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.209 Å

5db7
Literature

Structure of human dna polymerase beta host-guest complex with the n7mg base paired with a dt

Koag, M.C. , Lee, S.

Primary Citation of Related Structures: 5DB7


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase beta A 335 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQDIVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQLPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSE

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*CP*CP*GP*AP*CP*GP*TP*CP*GP*CP*AP*TP*TP*AP*GP*C)-3') t 16 NA CCGACGTCGCATTAGC
DNA (5'-D(*GP*CP*TP*(FMG)P*AP*TP*GP*CP*GP*A)-3') p 10 NA GCTGATGCGA
DNA (5'-D(P*GP*TP*CP*GP*G)-3') d 5 NA GTCGG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2015-08-21
Deposition Author(s): Koag, M.C. , Lee, S.